Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HutC in Burkholderia cepacia AMMD

Properties
Regulator type: Transcription factor
TF locus tag: Bamb_5835, Bamb_5462, Bamb_2210
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Regulog: HutC - Burkholderia
Statistics of regulated genes:
- Genes 17
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 46 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -150
Score: 5.7
Sequence: CAAGTTGTATATACAAGAAT
Locus tag: Bamb_1129
Name: COG1457 (CodB)
Funciton: Permease, cytosine/purines, uracil, thiamine, allantoin family protein
Bamb_1129
COG1457 (CodB)
Permease, cytosine/purines, uracil, thiamine, allantoin family protein
Position: -137
Score: 4.4
Sequence: CGAGCGGTCTAGACTGCATC
Locus tag: Bamb_4897
Name: COG834 (HisJ)
Funciton: ABC amino acid transporter, periplasmic ligand binding protein
Locus tag: Bamb_4896
Name: COG5285
Funciton: Phytanoyl-CoA dioxygenase
Bamb_4897
COG834 (HisJ)
ABC amino acid transporter, periplasmic ligand binding protein
Bamb_4896
COG5285
Phytanoyl-CoA dioxygenase
Position: -113
Score: 5.3
Sequence: AAAGTTGTATGTACAACTTG
Locus tag: Bamb_5463
Name: hisJ
Funciton: Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1)
Locus tag: Bamb_5464
Name: hisQ
Funciton: Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
Locus tag: Bamb_5465
Name: hisM
Funciton: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
Locus tag: Bamb_5466
Name: hisP
Funciton: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
Bamb_5463
hisJ
Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1)
Bamb_5464
hisQ
Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1)
Bamb_5465
hisM
Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
Bamb_5466
hisP
Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
Position: -225
Score: 3.7
Sequence: GCATTTGTCTATACTTTTCC
Locus tag: Bamb_5462
Name: hutC
Funciton: Histidine utilization repressor, GntR family
Bamb_5462
hutC
Histidine utilization repressor, GntR family
Position: -71
Score: 5.5
Sequence: GGGGTTGTCTAGACAAGTTC
Position: -26
Score: 5.6
Sequence: GAACTTGTCTAGACAGGATT
Locus tag: Bamb_2211
Name: hutH
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Bamb_2210
Name: hutC
Funciton: Histidine utilization repressor, GntR family
Locus tag: Bamb_2209
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Bamb_2208
Name: hutD
Funciton: Conserved hypothetical protein related to histidine degradation
Locus tag: Bamb_2207
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: Bamb_2206
Name: hutF
Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Locus tag: Bamb_2205
Name: hutG
Funciton: N-formylglutamate deformylase (EC 3.5.1.68)
Bamb_2211
hutH
Histidine ammonia-lyase (EC 4.3.1.3)
Bamb_2210
hutC
Histidine utilization repressor, GntR family
Bamb_2209
hutU
Urocanate hydratase (EC 4.2.1.49)
Bamb_2208
hutD
Conserved hypothetical protein related to histidine degradation
Bamb_2207
hutI
Imidazolonepropionase (EC 3.5.2.7)
Bamb_2206
hutF
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Bamb_2205
hutG
N-formylglutamate deformylase (EC 3.5.1.68)
Position: -148
Score: 5.6
Sequence: AATCCTGTCTAGACAAGTTC
Position: -103
Score: 5.5
Sequence: GAACTTGTCTAGACAACCCC
Locus tag: Bamb_2212
Name: COG834 (HisJ)
Funciton: ABC amino acid transporter, periplasmic ligand binding protein
Bamb_2212
COG834 (HisJ)
ABC amino acid transporter, periplasmic ligand binding protein
Position: -77
Score: 5.9
Sequence: CAAGTTGTATAGACAACTTG
Locus tag: Bamb_1095
Name: hisT
Funciton: Histidine transport protein (permease)
Bamb_1095
hisT
Histidine transport protein (permease)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise