Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HutC in Pseudomonas fluorescens Pf-5

Properties
Regulator type: Transcription factor
TF locus tag: PFL_0399
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Regulog: HutC - Pseudomonadaceae
Statistics of regulated genes:
- Genes 13
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 22 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -85
Score: 5.4
Sequence: TTATTTGTATATACATATAC
Locus tag: PFL_0399
Name: hutC
Funciton: Histidine utilization repressor, GntR family
Locus tag: PFL_0400
Name: hutD
Funciton: Conserved hypothetical protein related to histidine degradation
hutC
Histidine utilization repressor, GntR family
hutD
Conserved hypothetical protein related to histidine degradation

Position: -42
Score: 5.4
Sequence: GTATATGTATATACAAATAA
Locus tag: PFL_0398
Name: hutF
Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
hutF
Formiminoglutamic iminohydrolase (EC 3.5.3.13)

Position: -96
Score: 4.6
Sequence: TTGATTGCATATGCTTGTAT
Position: -86
Score: 6.1
Sequence: ATGCTTGTATGTACAAGTAA
Locus tag: PFL_0401
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: PFL_0402
Name: COG1457 (CodB)
Funciton: Permease, cytosine/purines, uracil, thiamine, allantoin family protein
Locus tag: PFL_0403
Name: hutX
Funciton: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
Locus tag: PFL_0404
Name: hutW
Funciton: Histidine ABC transporter, permease protein (TC 3.A.1)
Locus tag: PFL_0405
Name: hutV
Funciton: Histidine ABC transporter, ATP-binding protein
Locus tag: PFL_0406
Name: hutH2
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: PFL_0407
Name: hutH
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: PFL_0408
Name: hisT
Funciton: Histidine transport protein (permease)
Locus tag: PFL_0409
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: PFL_0410
Name: hutG
Funciton: N-formylglutamate deformylase (EC 3.5.1.68)
hutU
Urocanate hydratase (EC 4.2.1.49)
COG1457 (CodB)
Permease, cytosine/purines, uracil, thiamine, allantoin family protein
hutX
Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
hutW
Histidine ABC transporter, permease protein (TC 3.A.1)
hutV
Histidine ABC transporter, ATP-binding protein
hutH2
Histidine ammonia-lyase (EC 4.3.1.3)
hutH
Histidine ammonia-lyase (EC 4.3.1.3)
hisT
Histidine transport protein (permease)
hutI
Imidazolonepropionase (EC 3.5.2.7)
hutG
N-formylglutamate deformylase (EC 3.5.1.68)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD