Regulon of HutC in Pseudomonas fluorescens Pf-5
| Regulator type: | Transcription factor |
| TF locus tag: | PFL_0399 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -85
Score: 5.4 Sequence: TTATTTGTATATACATATAC
Locus tag: PFL_0399
Name: hutC Funciton: Histidine utilization repressor, GntR family
Locus tag: PFL_0400
Name: hutD Funciton: Conserved hypothetical protein related to histidine degradation |
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hutC
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Histidine utilization repressor, GntR family
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hutD
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Conserved hypothetical protein related to histidine degradation
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Position: -42
Score: 5.4 Sequence: GTATATGTATATACAAATAA
Locus tag: PFL_0398
Name: hutF Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
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hutF
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Formiminoglutamic iminohydrolase (EC 3.5.3.13)
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Position: -96
Score: 4.6 Sequence: TTGATTGCATATGCTTGTAT
Position: -86
Score: 6.1 Sequence: ATGCTTGTATGTACAAGTAA
Locus tag: PFL_0401
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: PFL_0402
Name: COG1457 (CodB) Funciton: Permease, cytosine/purines, uracil, thiamine, allantoin family protein
Locus tag: PFL_0403
Name: hutX Funciton: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
Locus tag: PFL_0404
Name: hutW Funciton: Histidine ABC transporter, permease protein (TC 3.A.1)
Locus tag: PFL_0405
Name: hutV Funciton: Histidine ABC transporter, ATP-binding protein
Locus tag: PFL_0406
Name: hutH2 Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: PFL_0407
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: PFL_0408
Name: hisT Funciton: Histidine transport protein (permease)
Locus tag: PFL_0409
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: PFL_0410
Name: hutG Funciton: N-formylglutamate deformylase (EC 3.5.1.68) |
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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COG1457 (CodB)
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Permease, cytosine/purines, uracil, thiamine, allantoin family protein
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hutX
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Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
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hutW
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Histidine ABC transporter, permease protein (TC 3.A.1)
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hutV
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Histidine ABC transporter, ATP-binding protein
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hutH2
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Histidine ammonia-lyase (EC 4.3.1.3)
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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hisT
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Histidine transport protein (permease)
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hutI
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Imidazolonepropionase (EC 3.5.2.7)
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hutG
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N-formylglutamate deformylase (EC 3.5.1.68)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |