Regulon of PrpR in Pseudomonas fluorescens Pf-5
| Regulator type: | Transcription factor |
| TF locus tag: | PFL_1860 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Regulog: | PrpR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - PrpR
- By TF family - GntR/Others
- By effector - 2-methylcitrate
- By pathway - Methylcitrate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -85
Score: 5.8 Sequence: ATTGTCGACAAT
Position: -12
Score: 4.8 Sequence: GGTGTCGACAAT
Locus tag: PFL_1860
Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family
Locus tag: PFL_1861
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PFL_1862
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) |
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prpR
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Propionate catabolism transcriptional regulator, GntR family
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prpB
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Methylisocitrate lyase (EC 4.1.3.30)
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prpC
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2-methylcitrate synthase (EC 2.3.3.5)
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Position: -113
Score: 4.4 Sequence: ATTGTCGGTAAT
Locus tag: PFL_2633
Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) |
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acnB
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Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |