Regulon of FadR in Colwellia psychrerythraea 34H
| Regulator type: | Transcription factor |
| TF locus tag: | CPS_3488 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor (activator) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - FadR
- By TF family - GntR/Others
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -55
Score: 5.6 Sequence: AAGAGGTCAGACCTCTT
Locus tag: CPS_3157
Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex
Locus tag: CPS_3156
Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex |
|||
|
fadI
|
FadI component of anaerobic fatty acid oxidation complex
|
||
|
fadJ
|
FadJ component of anaerobic fatty acid oxidation complex
|
||
|
Position: -30
Score: 4.7 Sequence: AACTGGTACGACCAATA
Locus tag: CPS_0925
Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
|||
|
fadH
|
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
|
||
|
Position: -70
Score: 4.6 Sequence: TAGTGGTATGACCAGTG
Locus tag: CPS_2263
Name: acdB Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
|||
|
acdB
|
Acyl-CoA dehydrogenase (EC 1.3.99.3)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |