Regulon of FadR in Glaciecola sp. HTCC2999

Properties
Regulator type:	Transcription factor
TF locus tag:	GHTCC_010100007592
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Alteromonadales
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -67 Score: 4.4 Sequence: TACTTGTAAGACCAGTT Locus tag: GHTCC_010100011184 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: GHTCC_010100011179 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	GHTCC_010100011184	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	GHTCC_010100011179	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -100 Score: 4.8 Sequence: TAGAGGTCGGACCACTG Locus tag: GHTCC_010100010338 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: GHTCC_010100010333 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	GHTCC_010100010338	fadI	FadI component of anaerobic fatty acid oxidation complex
	GHTCC_010100010333	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -27 Score: 4.6 Sequence: ATCTGGTCTGACCATCA Locus tag: GHTCC_010100006812 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	GHTCC_010100006812	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -59 Score: 4.9 Sequence: AACTGGTCAGATGAGCT Locus tag: GHTCC_010100000785 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	GHTCC_010100000785	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD