Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Zur in Alteromonadales bacterium TW-7

Properties
Regulator type: Transcription factor
TF locus tag: ATW7_16049, ATW7_18660
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Regulog: Zur - Alteromonadales
Statistics of regulated genes:
- Genes 11
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 46 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -56
Score: 6
Sequence: GAGTTGTTATAGTATAACATCCC
Locus tag: ATW7_12973
Name: COG4525
Funciton: ABC transporter ATP-binding protein
Locus tag: ATW7_12968
Name: COG1277
Funciton: hypothetical protein
Locus tag: ATW7_12963
Name: PF12040
Funciton: Gll1302 protein
Locus tag: ATW7_12958
Name: foxA
Funciton: TonB-dependent siderophore receptor
COG4525
ABC transporter ATP-binding protein
COG1277
hypothetical protein
PF12040
Gll1302 protein
foxA
TonB-dependent siderophore receptor

Position: -51
Score: 6.1
Sequence: ATATTGATATAATATAACATATC
Locus tag: ATW7_09166
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: ATW7_09171
Name: PF08856
Funciton: hypothetical protein
yciC
Putative metal chaperone, GTPase of COG0523 family
PF08856
hypothetical protein

Position: -146
Score: 5.1
Sequence: TAGATGTTATATTGTATCAATTG
Position: -118
Score: 5.9
Sequence: TATATGTTATATTATATCAATAG
Locus tag: ATW7_16049
Name: zur2
Funciton: Zinc uptake regulation protein paralog
Locus tag: ATW7_16044
Name: null
Funciton: hypothetical protein
zur2
Zinc uptake regulation protein paralog
hypothetical protein

Position: -64
Score: 6
Sequence: CTATTGATATAATATAACATATA
Position: -36
Score: 5.7
Sequence: CAATTGATACAATATAACATCTA
Locus tag: ATW7_16054
Name: omr1
Funciton: Zinc-regulated outer membrane receptor
omr1
Zinc-regulated outer membrane receptor

Position: -85
Score: 6
Sequence: TAAAAGTTATAGTATAACATTGT
Position: -47
Score: 5
Sequence: GAACTGTTATATTATATCACAAC
Locus tag: ATW7_07102
Name: omr
Funciton: Zinc-regulated outer membrane receptor
omr
Zinc-regulated outer membrane receptor

Position: -59
Score: 5.2
Sequence: CTTTTGTGATACTATCACTTTAT
Locus tag: ATW7_11681
Name: ribA
Funciton: GTP cyclohydrolase II (EC 3.5.4.25)
ribA
GTP cyclohydrolase II (EC 3.5.4.25)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD