Regulon of NrdR in Agrobacterium tumefaciens str. C58 (Cereon)
| Regulator type: | Transcription factor |
| TF locus tag: | Atu1166 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -534
Score: 5 Sequence: ATACTATATGTGGTGT
Locus tag: Atu0068
Name: nrdH Funciton: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Locus tag: Atu0069
Name: nrdI Funciton: Ribonucleotide reductase stimulatory protein NrdI
Locus tag: Atu0070
Name: nrdE Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Atu0071
Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) |
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nrdH
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Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
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nrdI
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Ribonucleotide reductase stimulatory protein NrdI
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nrdE
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Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
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nrdF
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Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
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Position: -416
Score: 5 Sequence: ACACAATATCTTGTGG
Position: -296
Score: 4.6 Sequence: TCTCCATATTTAGCGT
Position: -170
Score: 5.3 Sequence: ACACTATATATAGTAG
Position: -137
Score: 4.2 Sequence: ACACGAGATACAGGGA
Locus tag: Atu1733
Name: nrdJ Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
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nrdJ
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Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |