Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Vibrio shilonii AK1

Properties
Regulator type: Transcription factor
TF locus tag: VSAK1_06320
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Vibrionales
Statistics of regulated genes:
- Genes 18
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 190 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -140
Score: 5.1
Sequence: TGTAATAAAATTTCA
Position: 5
Score: 5.6
Sequence: TGTAGTTAAATTACA
Locus tag: VSAK1_09453
Name: ppc
Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
VSAK1_09453
ppc
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Position: -265
Score: 4.9
Sequence: TGTAGGTAAATTACA
Position: -84
Score: 4.9
Sequence: TGTAATTGATTTACA
Locus tag: VSAK1_05765
Name: nirB
Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Locus tag: VSAK1_05770
Name: nirD
Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
VSAK1_05765
nirB
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
VSAK1_05770
nirD
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
Position: -63
Score: 5.2
Sequence: TGTAGTAAAATTACG
Locus tag: VSAK1_12617
Name: gpmM
Funciton: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
VSAK1_12617
gpmM
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Position: -157
Score: 5.1
Sequence: TGTAATCAAATTACA
Locus tag: VSAK1_00485
Name: ygaW
Funciton: Putative inner membrane protein
VSAK1_00485
ygaW
Putative inner membrane protein
Position: -483
Score: 4.7
Sequence: TGAAACTAAATTACA
Locus tag: VSAK1_13982
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: VSAK1_13977
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
VSAK1_13982
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
VSAK1_13977
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -237
Score: 4.5
Sequence: TGTAATCTTATTTCA
Position: -57
Score: 5.3
Sequence: TGTAATTTAACTACC
Locus tag: VSAK1_04037
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: VSAK1_04042
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
VSAK1_04037
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
VSAK1_04042
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Position: -390
Score: 5.6
Sequence: TGTAATAAAATTACA
Position: -193
Score: 4.3
Sequence: TGTAATTTATCAACG
Locus tag: VSAK1_20779
Name: mtlA
Funciton: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: VSAK1_20784
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Locus tag: VSAK1_20789
Name: mtlR
Funciton: Mannitol operon repressor
VSAK1_20779
mtlA
PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
VSAK1_20784
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
VSAK1_20789
mtlR
Mannitol operon repressor
Position: -85
Score: 4.4
Sequence: TGTTTTTTTATTACA
Locus tag: VSAK1_14807
Name: pntA
Funciton: NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
Locus tag: VSAK1_14802
Name: pntB
Funciton: NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
VSAK1_14807
pntA
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)
VSAK1_14802
pntB
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
Position: -183
Score: 4.4
Sequence: TGAAAAATTATTACG
Locus tag: VSAK1_09208
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
VSAK1_09208
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -44
Score: 4.7
Sequence: TGTAATAAAATGACG
Locus tag: VSAK1_00270
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
VSAK1_00270
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -112
Score: 5.3
Sequence: TGAAATTAAATTACA
Locus tag: VSAK1_18594
Name: glgX
Funciton: Glycogen debranching enzyme (EC 3.2.1.-)
VSAK1_18594
glgX
Glycogen debranching enzyme (EC 3.2.1.-)
Position: -321
Score: 4.9
Sequence: TGTAATTATGTTACG
Position: -170
Score: 4.1
Sequence: TGAAACTAAATTTCG
Locus tag: VSAK1_26880
Name: ptsG
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
VSAK1_26880
ptsG
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
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