Regulon of DesT in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_0667 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-CoA; Unsaturated acyl-ACP |
| Regulog: | DesT - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FabR
- By taxonomy - Pseudomonadaceae
- By TF family - TetR
- By effector - Unsaturated acyl-CoA
- By effector - Unsaturated acyl-ACP
- By pathway - Fatty acid biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -144
Score: 5.5 Sequence: AGAGTACAACTGTACTCA
Locus tag: Pmen_2469
Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
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fabA
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3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
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Position: -47
Score: 5.2 Sequence: AGTGAACGCCCGTACACT
Locus tag: Pmen_2584
Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) |
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plsC
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1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
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Position: -71
Score: 5.9 Sequence: AGTGAACAACTGTTGACT
Position: -29
Score: 5.3 Sequence: TGTGCACAAGTGTTCACT
Locus tag: Pmen_0668
Name: desC Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Locus tag: Pmen_0669
Name: desB Funciton: Acyl-CoA delta-9-desaturase, DesB |
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desC
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Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
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desB
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Acyl-CoA delta-9-desaturase, DesB
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |