Regulon of Cobalamin in Desulfovibrio magneticus RS-1

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	7
- Operons	2

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -388 Score: 79.5 Sequence: AAGAGGGAATCCGGT... Locus tag: DMR_44320 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: DMR_44330 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	DMR_44320	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	DMR_44330	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -291 Score: 83.9 Sequence: CTCCCCGGAAATCGA... Locus tag: DMR_15530 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: DMR_15520 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: DMR_15510 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: DMR_15500 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: DMR_15490 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	DMR_15530	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	DMR_15520	btuC	Vitamin B12 ABC transporter, permease component BtuC
	DMR_15510	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	DMR_15500	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	DMR_15490	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD