Regulon of Cobalamin in Desulfovibrio piger ATCC 29098

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	7
- Operons	3

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -330 Score: 71.6 Sequence: CATCTTGAGCGGGCA... Locus tag: DESPIG_00246 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: DESPIG_00247 Name: null Funciton: Hypothetical protein Locus tag: DESPIG_00248 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	DESPIG_00246	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	DESPIG_00247		Hypothetical protein
	DESPIG_00248	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -220 Score: 47.8 Sequence: CCCAAACCGTTTCTG... Locus tag: DESPIG_01756 Name: cbiK2 Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	DESPIG_01756	cbiK2	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Position: -106 Score: 83.1 Sequence: TAGAGTAGCGCGTCC... Locus tag: DESPIG_00414 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: DESPIG_00415 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: DESPIG_00416 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
	DESPIG_00414	btuC	Vitamin B12 ABC transporter, permease component BtuC
	DESPIG_00415	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	DESPIG_00416	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD