Regulon of Cobalamin in Desulfovibrio vulgaris Hildenborough

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	8
- Operons	3

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -322 Score: 59 Sequence: TATCAATATGGAGTG... Locus tag: DVU3371 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	DVU3371	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -348 Score: 56.3 Sequence: TTCCCCGTCTGCTAT... Locus tag: DVU2947 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: DVU2946 Name: null Funciton: Hypothetical protein
	DVU2947	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	DVU2946		Hypothetical protein
Position: -318 Score: 93 Sequence: GCCTATGCCGCACGA... Locus tag: DVU0650 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: DVU0649 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: DVU0648 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: DVU0647 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: DVU0646 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	DVU0650	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	DVU0649	btuC	Vitamin B12 ABC transporter, permease component BtuC
	DVU0648	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	DVU0647	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	DVU0646	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD