Regulon of Cobalamin in Fervidobacterium nodosum Rt17-B1

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Thermotogales
Under regulation:
- Genes	14
- Operons	3

Member of regulog collections

By taxonomy - Thermotogales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -261 Score: 122.2 Sequence: ATATTCCAAACTGCG... Locus tag: Fnod_1378 Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Locus tag: Fnod_1379 Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Locus tag: Fnod_1380 Name: null Funciton: Predicted transmembrane protein
	Fnod_1378	sucC	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
	Fnod_1379	sucD	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
	Fnod_1380		Predicted transmembrane protein
Position: -265 Score: 99.6 Sequence: AAAAACAAACCGAAT... Locus tag: Fnod_1365 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Fnod_1366 Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Locus tag: Fnod_1367 Name: null Funciton: Putative xylose isomerase domain protein Locus tag: Fnod_1368 Name: cobS Funciton: Cobalamin synthase Locus tag: Fnod_1369 Name: cbiP Funciton: Cobyric acid synthase Locus tag: Fnod_1370 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: Fnod_1371 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: Fnod_1372 Name: Fnod_1372 Funciton: Putative ATP binding protein Locus tag: Fnod_1373 Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
	Fnod_1365	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Fnod_1366	cobU	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
	Fnod_1367		Putative xylose isomerase domain protein
	Fnod_1368	cobS	Cobalamin synthase
	Fnod_1369	cbiP	Cobyric acid synthase
	Fnod_1370	cbiB	Adenosylcobinamide-phosphate synthase
	Fnod_1371	cobD	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
	Fnod_1372	Fnod_1372	Putative ATP binding protein
	Fnod_1373	btuR	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Position: -231 Score: 96.8 Sequence: AATAAACCTCCCTTT... Locus tag: Fnod_0257 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Fnod_0256 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
	Fnod_0257	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Fnod_0256	btuC	Vitamin B12 ABC transporter, permease component BtuC

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD