Regulon of PedR in Synechocystis sp. PCC 6803

Properties
Regulator type:	Transcription factor
TF locus tag:	ssl0564
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Regulog:	PedR - Cyanobacteria
Statistics of regulated genes:
- Genes	8
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LuxR
By effector - Trx, thioredoxin protein
By pathway - Photosynthesis
By pathway - Carbon fixation

Regulated operons
	Locus Tag	Name	Function
Position: -20 Score: 4.3 Sequence: AGGTATTTATTCTT Locus tag: slr1291 Name: ndhD2 Funciton: NADH dehydrogenase subunit
	slr1291	ndhD2	NADH dehydrogenase subunit
Position: -18 Score: 4.8 Sequence: AAGCATAAATACCT Locus tag: slr1957 Name: slr1957 Funciton: Conserved hypothetical protein
	slr1957	slr1957	Conserved hypothetical protein
Position: -182 Score: 3.4 Sequence: AAGCATTAAGAATT Locus tag: slr0772 Name: chlB Funciton: Light-independent protochlorophyllide reductase subunit B
	slr0772	chlB	Light-independent protochlorophyllide reductase subunit B
Position: -196 Score: 4.8 Sequence: AAGTAACTATACCC Position: -178 Score: 4 Sequence: AAGTTATTTTATTT Locus tag: slr0749 Name: chlL Funciton: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
	slr0749	chlL	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
Position: -27 Score: 3.5 Sequence: GAGTTGAAATACTT Locus tag: sll0807 Name: rpe Funciton: Ribulose-phosphate 3-epimerase
	sll0807	rpe	Ribulose-phosphate 3-epimerase
Position: -349 Score: 4.8 Sequence: GAGTAAATATACCT Locus tag: sll0296 Name: sll0296 Funciton: Conserved hypothetical protein
	sll0296	sll0296	Conserved hypothetical protein
Position: -28 Score: 4.8 Sequence: GAGTAAATATACCT Locus tag: ssl0564 Name: pedR Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
	ssl0564	pedR	Thioredoxin status sensitive transcription regulator, LuxR family
Position: -242 Score: 3.5 Sequence: AATTAAAATTAATC Locus tag: slr0750 Name: chlN Funciton: Light-independent protochlorophyllide reductase subunit N
	slr0750	chlN	Light-independent protochlorophyllide reductase subunit N

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD