Regulon of PedR in Synechococcus sp. PCC 7002

Properties
Regulator type:	Transcription factor
TF locus tag:	SYNPCC7002_A0641
Regulator family:	LuxR
Regulation mode:	repressor (activator)
Biological process:	Photosynthesis; Carbon fixation
Effector:	Trx, thioredoxin protein
Regulog:	PedR - Cyanobacteria
Statistics of regulated genes:
- Genes	5
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Cyanobacteria
By TF family - LuxR
By effector - Trx, thioredoxin protein
By pathway - Photosynthesis
By pathway - Carbon fixation

Regulated operons
	Locus Tag	Name	Function
Position: -257 Score: 3.7 Sequence: AAGAAAGTTTATCT Locus tag: SYNPCC7002_A0641 Name: pedR Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
	SYNPCC7002_A0641	pedR	Thioredoxin status sensitive transcription regulator, LuxR family
Position: -217 Score: 5 Sequence: AAGTAATTATACCC Locus tag: SYNPCC7002_A1219 Name: slr1957 Funciton: Conserved hypothetical protein
	SYNPCC7002_A1219	slr1957	Conserved hypothetical protein
Position: -14 Score: 4.6 Sequence: GAGTAAAAATACCT Locus tag: SYNPCC7002_A1652 Name: chlB Funciton: Light-independent protochlorophyllide reductase subunit B
	SYNPCC7002_A1652	chlB	Light-independent protochlorophyllide reductase subunit B
Position: -20 Score: 4.5 Sequence: AAGTATTTTTTCCT Locus tag: SYNPCC7002_A1973 Name: ndhD Funciton: NADH dehydrogenase subunit
	SYNPCC7002_A1973	ndhD	NADH dehydrogenase subunit
Position: -63 Score: 4.1 Sequence: AAGCATAAATTCCC Locus tag: SYNPCC7002_A1792 Name: sll0296 Funciton: Conserved hypothetical protein
	SYNPCC7002_A1792	sll0296	Conserved hypothetical protein

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