Regulon of PedR in Cyanothece sp. PCC 8801
| Regulator type: | Transcription factor |
| TF locus tag: | PCC8801_4139 |
| Regulator family: | LuxR |
| Regulation mode: | repressor (activator) |
| Biological process: | Photosynthesis; Carbon fixation |
| Effector: | Trx, thioredoxin protein |
| Regulog: | PedR - Cyanobacteria |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By TF family - LuxR
- By effector - Trx, thioredoxin protein
- By pathway - Photosynthesis
- By pathway - Carbon fixation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -28
Score: 4.7 Sequence: AAGTAAATGTACTA
Locus tag: PCC8801_4139
Name: pedR Funciton: Thioredoxin status sensitive transcription regulator, LuxR family |
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pedR
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Thioredoxin status sensitive transcription regulator, LuxR family
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Position: -148
Score: 4.5 Sequence: AAGCAAGATTACCT
Locus tag: PCC8801_3714
Name: slr1957 Funciton: Conserved hypothetical protein |
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slr1957
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Conserved hypothetical protein
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Position: -42
Score: 4.2 Sequence: AGGCAAATACACTT
Locus tag: PCC8801_0791
Name: chlL Funciton: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein |
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chlL
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Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
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Position: -357
Score: 4.7 Sequence: AAGCAACTTTACCT
Locus tag: PCC8801_0789
Name: chlN Funciton: Light-independent protochlorophyllide reductase subunit N |
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chlN
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Light-independent protochlorophyllide reductase subunit N
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Position: -275
Score: 3.6 Sequence: AAGCAGCTATTCTG
Locus tag: PCC8801_1619
Name: rpe Funciton: Ribulose-phosphate 3-epimerase |
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rpe
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Ribulose-phosphate 3-epimerase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |