Regulon of TrpR in Vibrio shilonii AK1
| Regulator type: | Transcription factor |
| TF locus tag: | VSAK1_14107 |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Tryptophan biosynthesis |
| Effector: | Tryptophan |
| Regulog: | TrpR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - TrpR
- By taxonomy - Vibrionales
- By TF family - TrpR
- By effector - Tryptophan
- By pathway - Tryptophan biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -22
Score: 5.9 Sequence: TGTACCAGCAAACTAGTACG
Locus tag: VSAK1_12140
Name: COG0733 Funciton: Predicted tryptophan transporter, SNF family |
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COG0733
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Predicted tryptophan transporter, SNF family
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Position: -333
Score: 6.5 Sequence: CGAACTAGTTAACTAGTACG
Locus tag: VSAK1_01022
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAK1_01017
Name: trpD_a Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAK1_01012
Name: trpD_b Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAK1_01007
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAK1_01002
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAK1_00997
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpE
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Anthranilate synthase, aminase component (EC 4.1.3.27)
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trpD_a
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Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
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trpD_b
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Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
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trpC
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Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
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trpB
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Tryptophan synthase beta chain (EC 4.2.1.20)
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trpA
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Tryptophan synthase alpha chain (EC 4.2.1.20)
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Position: -160
Score: 5.1 Sequence: AGTACTAGCTGGCTAGTACT
Locus tag: VSAK1_04012
Name: aroA Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
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aroA
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5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |