Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TrpR in Vibrio salmonicida LFI1238

Properties
Regulator type: Transcription factor
TF locus tag: VSAL_I0659
Regulator family: TrpR
Regulation mode: repressor
Biological process: Tryptophan biosynthesis
Effector: Tryptophan
Regulog: TrpR - Vibrionales
Statistics of regulated genes:
- Genes 7
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 24 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -23
Score: 4.8
Sequence: TGTACTAGTGTGGTGATACA
Locus tag: VSAL_I0762
Name: COG0733
Funciton: Predicted tryptophan transporter, SNF family
COG0733
Predicted tryptophan transporter, SNF family

Position: -339
Score: 6.3
Sequence: CGCACTAGTTTACTAGTACG
Locus tag: VSAL_I1154
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAL_I1153
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAL_I1152
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAL_I1151
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAL_I1150
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAL_I1149
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE
Anthranilate synthase, aminase component (EC 4.1.3.27)
trpD_a
Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
trpD_b
Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
trpC
Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
trpB
Tryptophan synthase beta chain (EC 4.2.1.20)
trpA
Tryptophan synthase alpha chain (EC 4.2.1.20)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD