Regulon of AraR in Bacillus licheniformis DSM 13
| Regulator type: | Transcription factor |
| TF locus tag: | BLi02061 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - AraR
- By TF family - GntR/Others
- By effector - Arabinose
- By pathway - Arabinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -138
Score: 5 Sequence: ATATTTATATGAACATATTA
Position: -106
Score: 5.8 Sequence: ACATATGTACGTACAAAAAA
Locus tag: BLi02062
Name: araK Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BLi02063
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BLi02064
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BLi02065
Name: araE Funciton: L-arabinose-proton symporter |
|||
|
araK
|
Ribulokinase (EC 2.7.1.16)
|
||
|
araD
|
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
|
||
|
araA
|
L-arabinose isomerase (EC 5.3.1.4)
|
||
|
araE
|
L-arabinose-proton symporter
|
||
|
Position: -155
Score: 5.2 Sequence: GAAGTTGTTCGTACAAATAT
Position: -125
Score: 5.7 Sequence: TTAGTTGTACGTACATATAA
Locus tag: BLi03028
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BLi03027
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BLi03026
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BLi03025
Name: egsA Funciton: Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC 1.1.1.261)
Locus tag: BLi03024
Name: araN Funciton: Alpha-arabinosides ABC transport system, substrate-binding protein
Locus tag: BLi03023
Name: araP Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: BLi03022
Name: araQ Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: BLi03021
Name: abfA Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55) |
|||
|
araA
|
L-arabinose isomerase (EC 5.3.1.4)
|
||
|
araB
|
Ribulokinase (EC 2.7.1.16)
|
||
|
araD
|
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
|
||
|
egsA
|
Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC 1.1.1.261)
|
||
|
araN
|
Alpha-arabinosides ABC transport system, substrate-binding protein
|
||
|
araP
|
Alpha-arabinosides ABC transport system, permease protein 1
|
||
|
araQ
|
Alpha-arabinosides ABC transport system, permease protein 2
|
||
|
abfA
|
Alpha-N-arabinofuranosidase (EC 3.2.1.55)
|
||
|
Position: -192
Score: 5.8 Sequence: TTTTTTGTACGTACATATGT
Position: -160
Score: 5 Sequence: TAATATGTTCATATAAATAT
Locus tag: BLi02061
Name: araR Funciton: Transcriptional repressor of arabinoside utilization, GntR family |
|||
|
araR
|
Transcriptional repressor of arabinoside utilization, GntR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |