Regulon of ExuR in Erwinia carotovora subsp. atroseptica SCRI1043
| Regulator type: | Transcription factor |
| TF locus tag: | ECA0643 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization |
| Effector: | Galacturonate |
| Regulog: | ExuR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ExuR/UxuR
- By taxonomy - Enterobacteriales
- By TF family - GntR/Others
- By effector - Galacturonate
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -67
Score: 5.4 Sequence: TAATTGGTGTGATATCTTT
Locus tag: ECA0645
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) |
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uxaC
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Uronate isomerase (EC 5.3.1.12)
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Position: -185
Score: 6.2 Sequence: AAAGTTGTATGACAAATTA
Locus tag: ECA0644
Name: exuT Funciton: Hexuronate transporter |
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exuT
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Hexuronate transporter
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Position: -98
Score: 5.9 Sequence: TAAGTGGTATAACAAATCA
Locus tag: ECA0643
Name: exuR Funciton: D-galacturonate transcriptional repressor, GntR family |
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exuR
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D-galacturonate transcriptional repressor, GntR family
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Position: -176
Score: 4.8 Sequence: AAATTGGTTTACCAAATTG
Locus tag: ECA1966
Name: lfaR Funciton: putative transcriptional regulator, LacI family |
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lfaR
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putative transcriptional regulator, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |