Regulon of ExuR in Edwardsiella tarda EIB202
| Regulator type: | Transcription factor |
| TF locus tag: | ETAE_0434 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization |
| Effector: | Galacturonate |
| Regulog: | ExuR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ExuR/UxuR
- By taxonomy - Enterobacteriales
- By TF family - GntR/Others
- By effector - Galacturonate
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -93
Score: 5.3 Sequence: AAAGTGGTGTGATAACCGT
Locus tag: ETAE_1036
Name: gntP Funciton: Fructuronate transporter GntP |
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gntP
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Fructuronate transporter GntP
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Position: -282
Score: 5.2 Sequence: GAATCTGTATGACAAGTTA
Locus tag: ETAE_0435
Name: exuT Funciton: Hexuronate transporter |
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exuT
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Hexuronate transporter
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Position: -68
Score: 5.8 Sequence: AAAGTGGTATAACAACTCG
Locus tag: ETAE_0434
Name: exuR Funciton: D-galacturonate transcriptional repressor, GntR family |
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exuR
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D-galacturonate transcriptional repressor, GntR family
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Position: -69
Score: 6.1 Sequence: AAATTGGTGTGATAACTTC
Locus tag: ETAE_0436
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: ETAE_0437
Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Locus tag: ETAE_0438
Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) |
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uxaC
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Uronate isomerase (EC 5.3.1.12)
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uxaB
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Altronate oxidoreductase (EC 1.1.1.58)
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uxaA
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Altronate hydrolase (EC 4.2.1.7)
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Position: -89
Score: 4.7 Sequence: CAAGTGGTCTAACACCTTT
Locus tag: ETAE_2291
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
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uxuB
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D-mannonate oxidoreductase (EC 1.1.1.57)
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Position: -101
Score: 4.7 Sequence: GATTTGGTATGACAGATTA
Locus tag: ETAE_2289
Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8) |
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uxuA
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Mannonate dehydratase (EC 4.2.1.8)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |