Regulon of RhgR in Paenibacillus sp. JDR-2
| Regulator type: | Transcription factor |
| TF locus tag: | Pjdr2_4099 |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Regulog: | RhgR - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - AraC
- By pathway - Rhamnogalacturonides utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -110
Score: 9.2 Sequence: GTCTGTTTTTT-(10)-CACTGGTTATT
Position: -89
Score: 9.3 Sequence: CACTGGTTATT-(10)-CTCTCCTTTTT
Locus tag: Pjdr2_3535
Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: Pjdr2_3534
Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: Pjdr2_3533
Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 |
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rhiL
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Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
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rhiF
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Putatuve rhamnogalacturonides ABC transporter, permease component 1
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rhiG
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Putatuve rhamnogalacturonides ABC transporter, permease component 2
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |