Regulon of RocR in Geobacillus kaustophilus HTA426

Properties
Regulator type:	Transcription factor
TF locus tag:	GK0185
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Arginine degradation; Ornithine degradation
Effector:	Ornithine; L-citrulline
Regulog:	RocR - Bacillales
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - Fis
By effector - Ornithine
By effector - L-citrulline
By pathway - Arginine degradation
By pathway - Ornithine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -168 Score: 7.7 Sequence: TGAAAAAA-(1)-TTTTTGCT Position: -93 Score: 8.1 Sequence: TGAAAAAT-(1)-ATTTTGCA Position: -37 Score: 7.7 Sequence: CGAAAAAT-(1)-TTTTTGCC Locus tag: GK0186 Name: rocC Funciton: Arginine/ornithine permease Locus tag: GK0187 Name: rocA Funciton: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Locus tag: GK0188 Name: rocD Funciton: Ornithine aminotransferase (EC 2.6.1.13) Locus tag: GK0189 Name: rocG Funciton: NAD-specific glutamate dehydrogenase (EC 1.4.1.2)
	GK0186	rocC	Arginine/ornithine permease
	GK0187	rocA	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
	GK0188	rocD	Ornithine aminotransferase (EC 2.6.1.13)
	GK0189	rocG	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)
Position: -159 Score: 8.1 Sequence: TGCAAAAT-(1)-ATTTTTCA Position: -84 Score: 7.7 Sequence: AGCAAAAA-(1)-TTTTTTCA Locus tag: GK0185 Name: rocR Funciton: Transcriptional activator of arginine utilization, Fis family
	GK0185	rocR	Transcriptional activator of arginine utilization, Fis family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD