Profile of regulator RocR in Bacillales
Properties
| Regulator family: |
Fis |
| Regulation mode: |
activator |
| Biological process: |
Arginine degradation; Ornithine degradation |
| Effector: |
Ornithine; L-citrulline |
| Regulog: |
RocR - Bacillales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bacillus subtilis subsp. subtilis str. 168
|
|
BSU40340 |
rocD |
-175 |
7.9 |
TGCAAAAG-(1)-ATTTTGCA |
|
BSU40350 |
rocR |
-82 |
7.9 |
TGCAAAAT-(1)-CTTTTGCA |
|
BSU37780 |
rocA |
-213 |
8.6 |
CGCAAAAT-(1)-ATTTTGCA |
|
BSU37780 |
rocA |
-169 |
8 |
CGCAAAAT-(1)-AATTTGCG |
|
Bacillus amyloliquefaciens FZB42
|
|
RBAM_037260 |
rocR |
-59 |
8.7 |
CGCAAAAT-(1)-TTTTTGCG |
|
RBAM_034980 |
rocA |
-199 |
7.6 |
CGCAAAGA-(1)-ATTTTGCA |
|
RBAM_034980 |
rocA |
-165 |
7.8 |
CGCAAAAT-(1)-TCTTTGCG |
|
RBAM_037250 |
rocD |
-177 |
8.7 |
CGCAAAAA-(1)-ATTTTGCG |
|
Bacillus pumilus SAFR-032
|
|
BPUM_3061 |
rocR |
-89 |
7.2 |
AGCAAAAT-(1)-TCTTTGCA |
|
BPUM_3060 |
rocD |
-137 |
7.2 |
TGCAAAGA-(1)-ATTTTGCT |
|
Bacillus licheniformis DSM 13
|
|
BLi00422 |
rocD |
-142 |
8.7 |
CGCAAAAT-(0)-TTTTTGCG |
|
BLi00421 |
rocR |
-22 |
8.7 |
CGCAAAAA-(0)-ATTTTGCG |
|
Geobacillus kaustophilus HTA426
|
|
GK0187 |
rocA |
-37 |
7.7 |
CGAAAAAT-(1)-TTTTTGCC |
|
GK0186 |
rocC |
-93 |
8.1 |
TGAAAAAT-(1)-ATTTTGCA |
|
GK0186 |
rocC |
-168 |
7.7 |
TGAAAAAA-(1)-TTTTTGCT |
|
GK0185 |
rocR |
-159 |
8.1 |
TGCAAAAT-(1)-ATTTTTCA |
|
GK0185 |
rocR |
-84 |
7.7 |
AGCAAAAA-(1)-TTTTTTCA |
|
Bacillus cereus ATCC 14579
|
|
BC0473 |
rocR |
-87 |
8.2 |
AGCAAAAA-(1)-TTTTTGCG |
|
Bacillus halodurans C-125
|
|
BH3944 |
rocR |
-116 |
8 |
CGAAAAAT-(1)-ATTTTTCT |
|
BH3944 |
rocR |
-73 |
7.3 |
CGAAAAAA-(1)-AATTTGCA |
|
BH3943 |
rocD |
-172 |
8 |
AGAAAAAT-(1)-ATTTTTCG |
|
BH3943 |
rocD |
-215 |
7.3 |
TGCAAATT-(1)-TTTTTTCG |
|
Bacillus clausii KSM-K16
|
|
ABC0017 |
rocD |
-173 |
8.5 |
CGCAAAAA-(1)-ATTTTTCG |
|
ABC0017 |
rocD |
-140 |
7.7 |
TGCAAAAA-(1)-TTTTTTCT |
|
ABC0016 |
rocR |
-95 |
7.7 |
AGAAAAAA-(1)-TTTTTGCA |
|
ABC0016 |
rocR |
-62 |
8.5 |
CGAAAAAT-(1)-TTTTTGCG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
