Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RocR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type: Transcription factor
TF locus tag: RBAM_037260
Regulator family: Fis
Regulation mode: activator
Biological process: Arginine degradation; Ornithine degradation
Effector: Ornithine; L-citrulline
Regulog: RocR - Bacillales
Statistics of regulated genes:
- Genes 7
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -199
Score: 7.6
Sequence: CGCAAAGA-(1)-ATTTTGCA
Position: -165
Score: 7.8
Sequence: CGCAAAAT-(1)-TCTTTGCG
Locus tag: RBAM_034980
Name: rocA
Funciton: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Locus tag: RBAM_034970
Name: rocB
Funciton: Putative N-deacylase involved in arginine and ornithine utilization
Locus tag: RBAM_034960
Name: rocC
Funciton: Arginine/ornithine permease
rocA
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
rocB
Putative N-deacylase involved in arginine and ornithine utilization
rocC
Arginine/ornithine permease

Position: -59
Score: 8.7
Sequence: CGCAAAAT-(1)-TTTTTGCG
Locus tag: RBAM_037260
Name: rocR
Funciton: Transcriptional activator of arginine utilization, Fis family
rocR
Transcriptional activator of arginine utilization, Fis family

Position: -177
Score: 8.7
Sequence: CGCAAAAA-(1)-ATTTTGCG
Locus tag: RBAM_037250
Name: rocD
Funciton: Ornithine aminotransferase (EC 2.6.1.13)
Locus tag: RBAM_037240
Name: rocE
Funciton: Arginine/ornithine/gamma-aminobutyrate permease
Locus tag: RBAM_037230
Name: rocF
Funciton: Arginase (EC 3.5.3.1)
rocD
Ornithine aminotransferase (EC 2.6.1.13)
rocE
Arginine/ornithine/gamma-aminobutyrate permease
rocF
Arginase (EC 3.5.3.1)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD