Regulon of RocR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type:	Transcription factor
TF locus tag:	RBAM_037260
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Arginine degradation; Ornithine degradation
Effector:	Ornithine; L-citrulline
Regulog:	RocR - Bacillales
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - Fis
By effector - Ornithine
By effector - L-citrulline
By pathway - Arginine degradation
By pathway - Ornithine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -199 Score: 7.6 Sequence: CGCAAAGA-(1)-ATTTTGCA Position: -165 Score: 7.8 Sequence: CGCAAAAT-(1)-TCTTTGCG Locus tag: RBAM_034980 Name: rocA Funciton: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Locus tag: RBAM_034970 Name: rocB Funciton: Putative N-deacylase involved in arginine and ornithine utilization Locus tag: RBAM_034960 Name: rocC Funciton: Arginine/ornithine permease
	RBAM_034980	rocA	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
	RBAM_034970	rocB	Putative N-deacylase involved in arginine and ornithine utilization
	RBAM_034960	rocC	Arginine/ornithine permease
Position: -59 Score: 8.7 Sequence: CGCAAAAT-(1)-TTTTTGCG Locus tag: RBAM_037260 Name: rocR Funciton: Transcriptional activator of arginine utilization, Fis family
	RBAM_037260	rocR	Transcriptional activator of arginine utilization, Fis family
Position: -177 Score: 8.7 Sequence: CGCAAAAA-(1)-ATTTTGCG Locus tag: RBAM_037250 Name: rocD Funciton: Ornithine aminotransferase (EC 2.6.1.13) Locus tag: RBAM_037240 Name: rocE Funciton: Arginine/ornithine/gamma-aminobutyrate permease Locus tag: RBAM_037230 Name: rocF Funciton: Arginase (EC 3.5.3.1)
	RBAM_037250	rocD	Ornithine aminotransferase (EC 2.6.1.13)
	RBAM_037240	rocE	Arginine/ornithine/gamma-aminobutyrate permease
	RBAM_037230	rocF	Arginase (EC 3.5.3.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD