Regulon of PhhR in Pseudomonas mendocina ymp

Properties
Regulator type:	Transcription factor
TF locus tag:	Pmen_3111
Regulator family:	TyrR
Regulation mode:	activator (repressor)
Biological process:	Aromatic amino acid metabolism
Effector:	Tyrosine; Phenylalanine
Regulog:	PhhR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By trascription factor - TyrR
By taxonomy - Pseudomonadaceae
By TF family - TyrR
By effector - Tyrosine
By effector - Phenylalanine
By pathway - Aromatic amino acid metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -195 Score: 4.7 Sequence: CTGGCAAGAAAACCTTACGC Position: -144 Score: 4.9 Sequence: CTGTAAGAAAAACTTGCCAA Locus tag: Pmen_1696 Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) Locus tag: Pmen_1697 Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Locus tag: Pmen_1698 Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2) Locus tag: Pmen_1699 Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) Locus tag: Pmen_1700 Name: COG0733 Funciton: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family
	Pmen_1696	hpd	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
	Pmen_1697	hmgA	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
	Pmen_1698	hmgC	Fumarylacetoacetase (EC 3.7.1.2)
	Pmen_1699	hmgB	Maleylacetoacetate isomerase (EC 5.2.1.2)
	Pmen_1700	COG0733	Predicted 4-Hydroxyphenylpyruvate transporter, SNF family
Position: -80 Score: 5.2 Sequence: CTGTCACATATTCTTGACGG Locus tag: Pmen_3111 Name: phhR Funciton: Phenylalanine degradation transcriptional activator, TyrR family
	Pmen_3111	phhR	Phenylalanine degradation transcriptional activator, TyrR family
Position: -193 Score: 5.2 Sequence: CCGTCAAGAATATGTGACAG Locus tag: Pmen_3112 Name: phhA Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1) Locus tag: Pmen_3113 Name: phhB Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) Locus tag: Pmen_3114 Name: phhC Funciton: Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
	Pmen_3112	phhA	Phenylalanine-4-hydroxylase (EC 1.14.16.1)
	Pmen_3113	phhB	Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
	Pmen_3114	phhC	Aromatic-amino-acid aminotransferase (EC 2.6.1.57)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD