Regulon of PhhR in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_3111 |
| Regulator family: | TyrR |
| Regulation mode: | activator (repressor) |
| Biological process: | Aromatic amino acid metabolism |
| Effector: | Tyrosine; Phenylalanine |
| Regulog: | PhhR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - TyrR
- By taxonomy - Pseudomonadaceae
- By TF family - TyrR
- By effector - Tyrosine
- By effector - Phenylalanine
- By pathway - Aromatic amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -195
Score: 4.7 Sequence: CTGGCAAGAAAACCTTACGC
Position: -144
Score: 4.9 Sequence: CTGTAAGAAAAACTTGCCAA
Locus tag: Pmen_1696
Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Locus tag: Pmen_1697
Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Pmen_1698
Name: hmgC Funciton: Fumarylacetoacetase (EC 3.7.1.2)
Locus tag: Pmen_1699
Name: hmgB Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2)
Locus tag: Pmen_1700
Name: COG0733 Funciton: Predicted 4-Hydroxyphenylpyruvate transporter, SNF family |
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hpd
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4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
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hmgA
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Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
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hmgC
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Fumarylacetoacetase (EC 3.7.1.2)
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hmgB
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Maleylacetoacetate isomerase (EC 5.2.1.2)
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COG0733
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Predicted 4-Hydroxyphenylpyruvate transporter, SNF family
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Position: -80
Score: 5.2 Sequence: CTGTCACATATTCTTGACGG
Locus tag: Pmen_3111
Name: phhR Funciton: Phenylalanine degradation transcriptional activator, TyrR family |
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phhR
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Phenylalanine degradation transcriptional activator, TyrR family
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Position: -193
Score: 5.2 Sequence: CCGTCAAGAATATGTGACAG
Locus tag: Pmen_3112
Name: phhA Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Locus tag: Pmen_3113
Name: phhB Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Locus tag: Pmen_3114
Name: phhC Funciton: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) |
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phhA
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Phenylalanine-4-hydroxylase (EC 1.14.16.1)
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phhB
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Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
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phhC
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Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |