Regulon of RutR in Escherichia coli str. K-12 substr. MG1655
| Regulator type: | Transcription factor |
| TF locus tag: | b1013 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Regulog: | RutR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RutR
- By taxonomy - Enterobacteriales
- By TF family - TetR
- By effector - Uracil
- By pathway - Pyrimidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -124
Score: 4.3 Sequence: AGTGGACTAAACGGTCAAAA
Locus tag: b1013
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family |
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rutR
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Transcriptional regulator RutR of pyrimidine catabolism, TetR family
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Position: -126
Score: 6.2 Sequence: TTTTGACCGTTTAGTCCACT
Locus tag: b1012
Name: rutA Funciton: Pyrimidine oxygenase
Locus tag: b1011
Name: rutB Funciton: Peroxyureidoacrylate / ureidoacrylate amido hydrolase
Locus tag: b1010
Name: rutC Funciton: Aminoacrylate peracid reductase
Locus tag: b1009
Name: rutD Funciton: Aminoacrylate hydrolase
Locus tag: b1008
Name: rutE Funciton: 3-hydroxy propionic acid dehydrogenase
Locus tag: b1007
Name: rutF Funciton: Flavin reductase
Locus tag: b1006
Name: rutG Funciton: Uracil permease |
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rutA
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Pyrimidine oxygenase
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rutB
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Peroxyureidoacrylate / ureidoacrylate amido hydrolase
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rutC
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Aminoacrylate peracid reductase
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rutD
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Aminoacrylate hydrolase
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rutE
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3-hydroxy propionic acid dehydrogenase
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rutF
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Flavin reductase
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rutG
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Uracil permease
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Position: -294
Score: 6.5 Sequence: TTTTGACCATTTGGTCCACT
Locus tag: b0032
Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: b0033
Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
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carA
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Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
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carB
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Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |