Regulon of GntR in Salmonella typhimurium LT2
| Regulator type: | Transcription factor |
| TF locus tag: | STM3543 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Regulog: | GntR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - GntR
- By TF family - LacI
- By effector - Gluconate
- By pathway - Gluconate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -212
Score: 6.1 Sequence: GTATTTTACCGGTAACATGA
Locus tag: STM1885
Name: edd Funciton: 6-phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: STM1884
Name: eda Funciton: 2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14) |
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edd
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6-phosphogluconate dehydratase (EC 4.2.1.12)
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eda
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2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
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Position: -61
Score: 6.4 Sequence: CAATGTTACCGATAACAGTT
Position: -48
Score: 5.1 Sequence: AACAGTTACCCGTAACAAAT
Locus tag: STM3542
Name: gntK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12)
Locus tag: STM3541
Name: gntU Funciton: Low-affinity gluconate transporter |
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gntK
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Thermoresistant gluconokinase (EC 2.7.1.12)
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gntU
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Low-affinity gluconate transporter
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Position: -119
Score: 5.1 Sequence: CAATGTTACGCATAACGTGA
Locus tag: STM4485
Name: idnK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12) |
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idnK
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Thermoresistant gluconokinase (EC 2.7.1.12)
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Position: -178
Score: 6 Sequence: ATATGTTACCCGTATCATTC
Position: -37
Score: 4.7 Sequence: TGACGTTACCCATAACAAAG
Locus tag: STM3512
Name: gntT Funciton: High-affinity H+/gluconate symporter |
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gntT
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High-affinity H+/gluconate symporter
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Position: -116
Score: 4.3 Sequence: TcAcGTTAtgcGTAACATTg
Locus tag: STM4484
Name: idnD Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: STM4483
Name: idnO Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: STM4482
Name: idnT Funciton: L-idonate and D-gluconate transporter
Locus tag: STM4481
Name: idnR Funciton: L-idonate utilization transcriptional regulator IdnR, LacI family |
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idnD
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L-idonate 5-dehydrogenase (EC 1.1.1.264)
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idnO
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Gluconate 5-dehydrogenase (EC 1.1.1.69)
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idnT
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L-idonate and D-gluconate transporter
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idnR
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L-idonate utilization transcriptional regulator IdnR, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |