Regulon of GntR in Salmonella typhimurium LT2

Properties
Regulator type:	Transcription factor
TF locus tag:	STM3543
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Gluconate utilization
Effector:	Gluconate
Regulog:	GntR - Enterobacteriales
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 61 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - GntR
By TF family - LacI
By effector - Gluconate
By pathway - Gluconate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -212 Score: 6.1 Sequence: GTATTTTACCGGTAACATGA Locus tag: STM1885 Name: edd Funciton: 6-phosphogluconate dehydratase (EC 4.2.1.12) Locus tag: STM1884 Name: eda Funciton: 2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
	STM1885	edd	6-phosphogluconate dehydratase (EC 4.2.1.12)
	STM1884	eda	2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
Position: -61 Score: 6.4 Sequence: CAATGTTACCGATAACAGTT Position: -48 Score: 5.1 Sequence: AACAGTTACCCGTAACAAAT Locus tag: STM3542 Name: gntK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12) Locus tag: STM3541 Name: gntU Funciton: Low-affinity gluconate transporter
	STM3542	gntK	Thermoresistant gluconokinase (EC 2.7.1.12)
	STM3541	gntU	Low-affinity gluconate transporter
Position: -119 Score: 5.1 Sequence: CAATGTTACGCATAACGTGA Locus tag: STM4485 Name: idnK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12)
	STM4485	idnK	Thermoresistant gluconokinase (EC 2.7.1.12)
Position: -178 Score: 6 Sequence: ATATGTTACCCGTATCATTC Position: -37 Score: 4.7 Sequence: TGACGTTACCCATAACAAAG Locus tag: STM3512 Name: gntT Funciton: High-affinity H+/gluconate symporter
	STM3512	gntT	High-affinity H+/gluconate symporter
Position: -116 Score: 4.3 Sequence: TcAcGTTAtgcGTAACATTg Locus tag: STM4484 Name: idnD Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264) Locus tag: STM4483 Name: idnO Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69) Locus tag: STM4482 Name: idnT Funciton: L-idonate and D-gluconate transporter Locus tag: STM4481 Name: idnR Funciton: L-idonate utilization transcriptional regulator IdnR, LacI family
	STM4484	idnD	L-idonate 5-dehydrogenase (EC 1.1.1.264)
	STM4483	idnO	Gluconate 5-dehydrogenase (EC 1.1.1.69)
	STM4482	idnT	L-idonate and D-gluconate transporter
	STM4481	idnR	L-idonate utilization transcriptional regulator IdnR, LacI family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD