Regulon of NrdR in Salmonella typhimurium LT2
| Regulator type: | Transcription factor |
| TF locus tag: | STM0415 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Ribonucleotide reductases |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NrdR
- By taxonomy - Enterobacteriales
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Ribonucleotide reductases
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -136
Score: 3.7 Sequence: ACTCACCATATAGCGT
Position: -104
Score: 5.8 Sequence: CCCCTATATATAGTAT
Locus tag: STM2277
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: STM2278
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: STM2279
Name: yfaE Funciton: ferredoxin |
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nrdA
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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yfaE
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ferredoxin
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Position: -121
Score: 4.7 Sequence: TTCCCATATCTTGTAT
Position: -89
Score: 5.5 Sequence: CAACTACATCTAGTAT
Locus tag: STM2805
Name: nrdH Funciton: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Locus tag: STM2806
Name: nrdI Funciton: Ribonucleotide reductase stimulatory protein NrdI
Locus tag: STM2807
Name: nrdE Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: STM2808
Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) |
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nrdH
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Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
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nrdI
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Ribonucleotide reductase stimulatory protein NrdI
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nrdE
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Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
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nrdF
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Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
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Position: -207
Score: 4.5 Sequence: TCACTACATATAGACT
Position: -177
Score: 5 Sequence: ACCCAATATGTTGTAT
Locus tag: STM4452
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: STM4451
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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nrdD
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Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
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nrdG
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Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |