Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NsrR in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM4367
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Regulog: NsrR - Enterobacteriales
Statistics of regulated genes:
- Genes 25
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 73 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -79
Score: 4.8
Sequence: GATCCATTTACAATGCAAG
Position: -47
Score: 5.8
Sequence: GATGCATTTGATATACATC
Locus tag: STM2556
Name: hmp
Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
STM2556
hmp
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Position: -35
Score: 5.7
Sequence: CATGTATATTAAATATAAC
Locus tag: STM0937
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: STM0936
Name: hcr
Funciton: NADH oxidoreductase hcr (EC 1.-.-.-)
STM0937
hcp
Hydroxylamine reductase (EC 1.7.-.-)
STM0936
hcr
NADH oxidoreductase hcr (EC 1.-.-.-)
Position: -48
Score: 5.5
Sequence: GGTGTATATTAAATACATC
Locus tag: STM1808
Name: tehB2
Funciton: tellurite resistance-like protein TehB2
STM1808
tehB2
tellurite resistance-like protein TehB2
Position: -35
Score: 5.4
Sequence: AATGCATTTCAAATATACT
Locus tag: STM1609
Name: tehA
Funciton: Tellurite resistance protein TehA
Locus tag: STM1608
Name: tehB
Funciton: Tellurite resistance protein TehB
STM1609
tehA
Tellurite resistance protein TehA
STM1608
tehB
Tellurite resistance protein TehB
Position: -47
Score: 6.4
Sequence: GATGCATTTAAAATACAAC
Locus tag: STM4399
Name: dnrN
Funciton: Nitric oxide-dependent regulator DnrN or NorA
STM4399
dnrN
Nitric oxide-dependent regulator DnrN or NorA
Position: -167
Score: 4.4
Sequence: GTGGTATTTTACATACACT
Locus tag: STM4277
Name: nrfA
Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: STM4278.S
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: STM4279
Name: nrfC
Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: STM4280
Name: nrfD
Funciton: Nitrite reductase, NrfD component
Locus tag: STM4281
Name: nrfE
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
Locus tag: STM4282
Name: nrfG
Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
STM4277
nrfA
Nitrite reductase, cytochrome c(552)
STM4278.S
nrfB
Cytochrome c-type protein NrfB precursor
STM4279
nrfC
Nitrite reductase, Fe-S center subunit
STM4280
nrfD
Nitrite reductase, NrfD component
STM4281
nrfE
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
STM4282
nrfG
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
Position: -89
Score: 3.9
Sequence: ATGGTATTTAAAATACTGT
Locus tag: STM1271
Name: yeaR
Funciton: uncharacterized protein/domain, possibly involved in tellurite resistance
Locus tag: STM1272
Name: yoaG
Funciton: uncharacterized protein/domain, possibly involved in tellurite resistance
STM1271
yeaR
uncharacterized protein/domain, possibly involved in tellurite resistance
STM1272
yoaG
uncharacterized protein/domain, possibly involved in tellurite resistance
Position: -40
Score: 4.4
Sequence: GGTGTAAAATAAATACACC
Locus tag: STM2860
Name: ygbA
Funciton: hypothetical protein involved in nitrosative stress
STM2860
ygbA
hypothetical protein involved in nitrosative stress
Position: -208
Score: 3.7
Sequence: GATGTAAAAAAATAGCAAT
Position: -135
Score: 3.7
Sequence: AAGATATTTTGTATACAAC
Locus tag: STM1433
Name: grxD
Funciton: Probable monothiol glutaredoxin ydhD
STM1433
grxD
Probable monothiol glutaredoxin ydhD
Position: -185
Score: 4.3
Sequence: GTTGTATACAAAATATCTT
Locus tag: STM1432
Name: ydhO
Funciton: putative exported protein
Locus tag: STM1431
Name: sodB
Funciton: Superoxide dismutase [Fe] (EC 1.15.1.1)
STM1432
ydhO
putative exported protein
STM1431
sodB
Superoxide dismutase [Fe] (EC 1.15.1.1)
Position: -248
Score: 3.8
Sequence: TAGTCATTTTCTATACATC
Locus tag: STM1369
Name: sufA
Funciton: Iron binding protein SufA for iron-sulfur cluster assembly
Locus tag: STM1370
Name: sufB
Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: STM1371
Name: sufC
Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: STM1372
Name: sufD
Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: STM1373
Name: sufS
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: STM1374
Name: sufE
Funciton: Sulfur acceptor protein SufE for iron-sulfur cluster assembly
STM1369
sufA
Iron binding protein SufA for iron-sulfur cluster assembly
STM1370
sufB
Iron-sulfur cluster assembly protein SufB
STM1371
sufC
Iron-sulfur cluster assembly ATPase protein SufC
STM1372
sufD
Iron-sulfur cluster assembly protein SufD
STM1373
sufS
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
STM1374
sufE
Sulfur acceptor protein SufE for iron-sulfur cluster assembly
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