Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TyrR in Citrobacter koseri ATCC BAA-895

Properties
Regulator type: Transcription factor
TF locus tag: CKO_01393
Regulator family: TyrR
Regulation mode: activator (repressor)
Biological process: Aromatic amino acid metabolism
Effector: Tyrosine; Phenylalanine
Regulog: TyrR - Enterobacteriales
Statistics of regulated genes:
- Genes 13
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 106 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -307
Score: 4.3
Sequence: CTGGAAAGTTAAGTTTTCAC
Locus tag: CKO_03467
Name: tpl
Funciton: Tyrosine phenol-lyase (EC 4.1.99.2)
CKO_03467
tpl
Tyrosine phenol-lyase (EC 4.1.99.2)
Position: -101
Score: 3.8
Sequence: CTGTAAATCCTGCTTTCCAC
Locus tag: CKO_00409
Name: ipdC
Funciton: Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
CKO_00409
ipdC
Indole-3-pyruvate decarboxylase (EC 4.1.1.74)
Position: -90
Score: 4.2
Sequence: CTGTCAATAATTGTTGACAG
Locus tag: CKO_01393
Name: tyrR
Funciton: Transcriptional regulator of aromatic amino acid biosynthesis
CKO_01393
tyrR
Transcriptional regulator of aromatic amino acid biosynthesis
Position: -129
Score: 5.1
Sequence: CCGTAAAGTAAAATATACAG
Locus tag: CKO_04558
Name: mtr
Funciton: Tryptophan-specific transport protein
CKO_04558
mtr
Tryptophan-specific transport protein
Position: -87
Score: 4.4
Sequence: GAGTATTGAATTGTTTACGA
Position: -65
Score: 4.9
Sequence: TAGTAATTTTTGATTTACAC
Locus tag: CKO_03376
Name: COG2814
Funciton: Predicted tyrosine transporter, COG2814 family
CKO_03376
COG2814
Predicted tyrosine transporter, COG2814 family
Position: -165
Score: 5.3
Sequence: ATGTAAATTTTTATGTACGA
Position: -112
Score: 5.4
Sequence: ATGTAAAGTAAAATTTACGG
Position: -89
Score: 4
Sequence: GTGGATTGAAATCTTTACCG
Locus tag: CKO_03921
Name: aroF
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
Locus tag: CKO_03920
Name: tyrA
Funciton: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
CKO_03921
aroF
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
CKO_03920
tyrA
Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
Position: -76
Score: 5
Sequence: ccGTAAATTTttATTgACAg
Locus tag: CKO_02137
Name: ompF
Funciton: outer membrane porin F
CKO_02137
ompF
outer membrane porin F
Position: -83
Score: 4.6
Sequence: TCGTAAACAATGGTATACAC
Locus tag: CKO_01040
Name: tyrP
Funciton: Tyrosine-specific transport protein
CKO_01040
tyrP
Tyrosine-specific transport protein
Position: -87
Score: 5
Sequence: GcGTAAAcaTAttaaTACAa
Locus tag: CKO_03262
Name: aroP
Funciton: Aromatic amino acid transport protein AroP
CKO_03262
aroP
Aromatic amino acid transport protein AroP
Position: -238
Score: 5.4
Sequence: ATGTAATGTTATTTTTACAC
Position: -163
Score: 5
Sequence: GTGGAATGATTTATTTACAT
Locus tag: CKO_02783
Name: aroL
Funciton: Shikimate kinase III (EC 2.7.1.71)
Locus tag: CKO_02782
Name: yaiA
Funciton: hypothetical protein
Locus tag: CKO_02781
Name: aroM
Funciton: AroM family protein
CKO_02783
aroL
Shikimate kinase III (EC 2.7.1.71)
CKO_02782
yaiA
hypothetical protein
CKO_02781
aroM
AroM family protein
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