Regulog Zur - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | 4 | 1 |
| Desulfovibrio vulgaris str. Miyazaki F | 3 | 1 |
| Desulfovibrio desulfuricans G20 | 4 | 1 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | ||
| Desulfovibrio piger ATCC 29098 | ||
| Desulfovibrio salexigens DSM 2638 | 2 | 1 |
| Desulfovibrio magneticus RS-1 | 1 | 1 |
| Lawsonia intracellularis PHE/MN1-00 | ||
| Desulfomicrobium baculatum DSM 4028 | 2 | 1 |
| Desulfohalobium retbaense DSM 5692 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| znuA |
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Desulfovibrio vulgaris Hildenborough Site: position = -217 score = 6.54067 sequence = ATGCAACAGTGTTGCAT Gene: DVU1343: Zinc ABC transporter, periplasmic-binding protein ZnuA |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -56 score = 6.54067 sequence = ATGCAACAGAGTTGCAT Gene: DvMF_0119: Zinc ABC transporter, periplasmic-binding protein ZnuA |
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Desulfovibrio desulfuricans G20 Site: position = -48 score = 6.46572 sequence = ATGCAACTGAGTTGCAT Gene: Dde_2208: Zinc ABC transporter, periplasmic-binding protein ZnuA |
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Gene: Desal_3439: Zinc ABC transporter, periplasmic-binding protein ZnuA |
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Desulfovibrio magneticus RS-1 Site: position = 0 score = 6.27401 sequence = ATGCAACTTTGTTGCAT Gene: DMR_26850: Zinc ABC transporter, periplasmic-binding protein ZnuA |
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Desulfomicrobium baculatum DSM 4028 Site: position = -46 score = 5.91024 sequence = ATGCAATCCTGTTGCAT Gene: Dbac_0624: Zinc ABC transporter, periplasmic-binding protein ZnuA |
Gene: Dret_0025: Zinc ABC transporter, periplasmic-binding protein ZnuA |
Zinc ABC transporter, periplasmic-binding protein ZnuA |
| znuC |
Gene: DVU1342: Zinc ABC transporter, ATP-binding protein ZnuC |
Gene: DvMF_0118: Zinc ABC transporter, ATP-binding protein ZnuC |
Gene: Dde_2209: Zinc ABC transporter, ATP-binding protein ZnuC |
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Desulfovibrio salexigens DSM 2638 Site: position = -220 score = 5.5202 sequence = ATGAATAAAAGTTGCAT Gene: Desal_1080: Zinc ABC transporter, ATP-binding protein ZnuC |
Gene: DMR_26830: Zinc ABC transporter, ATP-binding protein ZnuC |
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Gene: Dbac_0623: Zinc ABC transporter, ATP-binding protein ZnuC |
Gene: Dret_0026: Zinc ABC transporter, ATP-binding protein ZnuC |
Zinc ABC transporter, ATP-binding protein ZnuC |
| znuB |
Gene: DVU1341: Zinc ABC transporter, inner membrane permease protein ZnuB |
Gene: DvMF_0117: Zinc ABC transporter, inner membrane permease protein ZnuB |
Gene: Dde_2210: Zinc ABC transporter, inner membrane permease protein ZnuB |
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Gene: Desal_1081: Zinc ABC transporter, inner membrane permease protein ZnuB |
Gene: DMR_26820: Zinc ABC transporter, inner membrane permease protein ZnuB |
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Gene: Dret_0027: Zinc ABC transporter, inner membrane permease protein ZnuB |
Zinc ABC transporter, inner membrane permease protein ZnuB |
| zur |
Gene: DVU1340: Zinc uptake regulation protein Zur |
Gene: DvMF_0116: Zinc uptake regulation protein Zur |
Gene: Dde_2211: Zinc uptake regulation protein Zur |
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Gene: Desal_0460: Zinc uptake regulation protein Zur |
Gene: DMR_26810: Zinc uptake regulation protein Zur |
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Gene: Dbac_0621: Zinc uptake regulation protein Zur |
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Zinc uptake regulation protein Zur |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |