Regulog DVU2644 - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - GntR/Others
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | 4 | 1 |
| Desulfovibrio vulgaris str. Miyazaki F | ||
| Desulfovibrio desulfuricans G20 | 3 | 1 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 2 | 1 |
| Desulfovibrio piger ATCC 29098 | 4 | 2 |
| Desulfovibrio salexigens DSM 2638 | 3 | 2 |
| Desulfovibrio magneticus RS-1 | ||
| Lawsonia intracellularis PHE/MN1-00 | ||
| Desulfomicrobium baculatum DSM 4028 | ||
| Desulfohalobium retbaense DSM 5692 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| DVU2647 |
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Desulfovibrio vulgaris Hildenborough Site: position = -42 score = 5.79944 sequence = AAAATGTCGACATTTA Gene: DVU2647: endoribonuclease, L-PSP family |
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Desulfovibrio desulfuricans G20 Site: position = -64 score = 5.33415 sequence = AAATTGTCGACAATCG Site: position = -176 score = 6.08586 sequence = CGAATGTCGACATTTT Gene: Dde_2582: endoribonuclease, L-PSP family |
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Desulfovibrio salexigens DSM 2638 Site: position = -67 score = 5.82737 sequence = AAAATGTCGACATTAG Site: position = -101 score = 4.35596 sequence = GAGATGTCGACATATA Gene: Desal_1392: endoribonuclease, L-PSP family |
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endoribonuclease, L-PSP family |
| DVU2646 |
Gene: DVU2646: 1-aminocyclopropane-1-carboxylate deaminase |
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Gene: Dde_2581: 1-aminocyclopropane-1-carboxylate deaminase |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -137 score = 5.23649 sequence = CAAATGTTGACATTTA Gene: Ddes_0339: 1-aminocyclopropane-1-carboxylate deaminase |
Gene: DESPIG_01487: 1-aminocyclopropane-1-carboxylate deaminase |
Gene: Desal_1391: 1-aminocyclopropane-1-carboxylate deaminase |
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1-aminocyclopropane-1-carboxylate deaminase |
| DVU2645 |
Gene: DVU2645: Na+/H+ antiporter family protein |
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Gene: Dde_2580: Na+/H+ antiporter family protein |
Gene: Ddes_0340: Na+/H+ antiporter family protein |
Gene: DESPIG_01486: Na+/H+ antiporter family protein |
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Na+/H+ antiporter family protein |
| DVU2644 |
Gene: DVU2644: transcriptional regulator, GntR family |
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Gene: Dde_2579: transcriptional regulator, GntR family |
Gene: Ddes_0341: transcriptional regulator, GntR family |
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Desulfovibrio piger ATCC 29098 Site: position = -204 score = 5.71 sequence = CGAATGTCGACATACT Site: position = -282 score = 6.08586 sequence = CGAATGTCGACATTTT Gene: DESPIG_01491: transcriptional regulator, GntR family |
Gene: Desal_1386: transcriptional regulator, GntR family |
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transcriptional regulator, GntR family |
| DESPIG_01488 |
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Desulfovibrio piger ATCC 29098 Site: position = -49 score = 6.08586 sequence = AAAATGTCGACATTCG Site: position = -127 score = 5.71 sequence = AGTATGTCGACATTCG Gene: DESPIG_01488: endoribonuclease, L-PSP family |
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endoribonuclease, L-PSP family |
| gltP |
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Gene: DESPIG_00436: probable H+/Na+-glutamate symporter |
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Desulfovibrio salexigens DSM 2638 Site: position = -255 score = 5.82737 sequence = ATAATGTCGACATTTG Gene: Desal_1393: probable H+/Na+-glutamate symporter |
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Gene: LI0018: probable H+/Na+-glutamate symporter |
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probable H+/Na+-glutamate symporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |