Regulog DVU2644 - Desulfovibrionales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Amino acid metabolism
Effector:
Phylum:	Proteobacteria/delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - GntR/Others
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Desulfovibrio vulgaris Hildenborough	4	1
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20	3	1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	2	1
Desulfovibrio piger ATCC 29098	4	2
Desulfovibrio salexigens DSM 2638	3	2
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
DVU2647	* Desulfovibrio vulgaris Hildenborough Site: position = -42 score = 5.79944 sequence = AAAATGTCGACATTTA Gene: DVU2647: endoribonuclease, L-PSP family	Desulfovibrio vulgaris str. Miyazaki F	* Desulfovibrio desulfuricans G20 Site: position = -64 score = 5.33415 sequence = AAATTGTCGACAATCG Site: position = -176 score = 6.08586 sequence = CGAATGTCGACATTTT Gene: Dde_2582: endoribonuclease, L-PSP family	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098	* Desulfovibrio salexigens DSM 2638 Site: position = -67 score = 5.82737 sequence = AAAATGTCGACATTAG Site: position = -101 score = 4.35596 sequence = GAGATGTCGACATATA Gene: Desal_1392: endoribonuclease, L-PSP family	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	endoribonuclease, L-PSP family
DVU2646	Desulfovibrio vulgaris Hildenborough Gene: DVU2646: 1-aminocyclopropane-1-carboxylate deaminase	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20 Gene: Dde_2581: 1-aminocyclopropane-1-carboxylate deaminase	* Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -137 score = 5.23649 sequence = CAAATGTTGACATTTA Gene: Ddes_0339: 1-aminocyclopropane-1-carboxylate deaminase	Desulfovibrio piger ATCC 29098 Gene: DESPIG_01487: 1-aminocyclopropane-1-carboxylate deaminase	Desulfovibrio salexigens DSM 2638 Gene: Desal_1391: 1-aminocyclopropane-1-carboxylate deaminase	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	1-aminocyclopropane-1-carboxylate deaminase
DVU2645	Desulfovibrio vulgaris Hildenborough Gene: DVU2645: Na+/H+ antiporter family protein	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20 Gene: Dde_2580: Na+/H+ antiporter family protein	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0340: Na+/H+ antiporter family protein	Desulfovibrio piger ATCC 29098 Gene: DESPIG_01486: Na+/H+ antiporter family protein	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	Na+/H+ antiporter family protein
DVU2644	Desulfovibrio vulgaris Hildenborough Gene: DVU2644: transcriptional regulator, GntR family	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20 Gene: Dde_2579: transcriptional regulator, GntR family	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gene: Ddes_0341: transcriptional regulator, GntR family	* Desulfovibrio piger ATCC 29098 Site: position = -204 score = 5.71 sequence = CGAATGTCGACATACT Site: position = -282 score = 6.08586 sequence = CGAATGTCGACATTTT Gene: DESPIG_01491: transcriptional regulator, GntR family	Desulfovibrio salexigens DSM 2638 Gene: Desal_1386: transcriptional regulator, GntR family	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	transcriptional regulator, GntR family
DESPIG_01488	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	* Desulfovibrio piger ATCC 29098 Site: position = -49 score = 6.08586 sequence = AAAATGTCGACATTCG Site: position = -127 score = 5.71 sequence = AGTATGTCGACATTCG Gene: DESPIG_01488: endoribonuclease, L-PSP family	Desulfovibrio salexigens DSM 2638	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	endoribonuclease, L-PSP family
gltP	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris str. Miyazaki F	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	Desulfovibrio piger ATCC 29098 Gene: DESPIG_00436: probable H+/Na+-glutamate symporter	* Desulfovibrio salexigens DSM 2638 Site: position = -255 score = 5.82737 sequence = ATAATGTCGACATTTG Gene: Desal_1393: probable H+/Na+-glutamate symporter	Desulfovibrio magneticus RS-1	Lawsonia intracellularis PHE/MN1-00 Gene: LI0018: probable H+/Na+-glutamate symporter	Desulfomicrobium baculatum DSM 4028	Desulfohalobium retbaense DSM 5692	probable H+/Na+-glutamate symporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DVU2644 - Desulfovibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --