Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog TM1030 - Thermotogales

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Thermotogae
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Thermotoga maritima MSB8 3 1
Thermotoga sp. RQ2 3 1
Thermotoga neapolitana DSM 4359 4 1
Thermotoga petrophila RKU-1 3 1
Thermotoga naphthophila RKU-10 3 1
Thermotoga lettingae TMO 3 1
Thermosipho africanus TCF52B
Thermosipho melanesiensis BI429
Fervidobacterium nodosum Rt17-B1
Petrotoga mobilis SJ95
Thermotogales bacterium TBF 19.5.1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
CTN_1539
 
Thermotoga maritima MSB8
 
Thermotoga sp. RQ2
*
Thermotoga neapolitana DSM 4359

Site:
position = -63
score = 5.9413
sequence = GATTGACTCATTAGTCAATT

Gene: CTN_1539: ABC transporter related precursor
 
Thermotoga petrophila RKU-1
 
Thermotoga naphthophila RKU-10
 
Thermotoga lettingae TMO
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1
ABC transporter related precursor
TM1028
*
Thermotoga maritima MSB8

Site:
position = -34
score = 7.09261
sequence = ATTTGACTGACCAGTCAATC

Gene: TM1028: Predicted ABC transport system, ATP-binding protein
*
Thermotoga sp. RQ2

Site:
position = -34
score = 7.09261
sequence = ATTTGACTGACCAGTCAATC

Gene: TRQ2_1780: Predicted ABC transport system, ATP-binding protein
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1538: Predicted ABC transport system, ATP-binding protein
*
Thermotoga petrophila RKU-1

Site:
position = -34
score = 7.09261
sequence = ATTTGACTGACCAGTCAATC

Gene: Tpet_1722: Predicted ABC transport system, ATP-binding protein
*
Thermotoga naphthophila RKU-10

Site:
position = -34
score = 7.09261
sequence = ATTTGACTGACCAGTCAATC

Gene: Tnap_1736: Predicted ABC transport system, ATP-binding protein
*
Thermotoga lettingae TMO

Site:
position = -65
score = 5.13666
sequence = TATTGACCACATGGTCAATA

Gene: Tlet_1862: Predicted ABC transport system, ATP-binding protein
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1
Predicted ABC transport system, ATP-binding protein
TM1029
 
Thermotoga maritima MSB8

Gene: TM1029: Predicted ABC transport system, permease protein
 
Thermotoga sp. RQ2

Gene: TRQ2_1779: Predicted ABC transport system, permease protein
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1537: Predicted ABC transport system, permease protein
 
Thermotoga petrophila RKU-1

Gene: Tpet_1721: Predicted ABC transport system, permease protein
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1735: Predicted ABC transport system, permease protein
 
Thermotoga lettingae TMO

Gene: Tlet_1861: Predicted ABC transport system, permease protein
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1
Predicted ABC transport system, permease protein
TM1030
 
Thermotoga maritima MSB8

Gene: TM1030: Predicted multidrug resistance transcription regulator, TetR family
 
Thermotoga sp. RQ2

Gene: TRQ2_1778: Predicted multidrug resistance transcription regulator, TetR family
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1536: Predicted multidrug resistance transcription regulator, TetR family
 
Thermotoga petrophila RKU-1

Gene: Tpet_1720: Predicted multidrug resistance transcription regulator, TetR family
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1734: Predicted multidrug resistance transcription regulator, TetR family
 
Thermotoga lettingae TMO

Gene: Tlet_1860: Predicted multidrug resistance transcription regulator, TetR family
 
Thermosipho africanus TCF52B
 
Thermosipho melanesiensis BI429
 
Fervidobacterium nodosum Rt17-B1
 
Petrotoga mobilis SJ95
 
Thermotogales bacterium TBF 19.5.1
Predicted multidrug resistance transcription regulator, TetR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD