Regulog IolR - Thermotogales
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Inositol utilization |
| Effector: | |
| Phylum: | Thermotogae |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By TF family - ROK
- By pathway - Inositol utilization
| Genome | Genes | Operons |
|---|---|---|
| Thermotoga maritima MSB8 | 6 | 1 |
| Thermotoga sp. RQ2 | ||
| Thermotoga neapolitana DSM 4359 | 6 | 1 |
| Thermotoga petrophila RKU-1 | 6 | 1 |
| Thermotoga naphthophila RKU-10 | 6 | 1 |
| Thermotoga lettingae TMO | ||
| Thermosipho africanus TCF52B | ||
| Thermosipho melanesiensis BI429 | ||
| Fervidobacterium nodosum Rt17-B1 | ||
| Petrotoga mobilis SJ95 | ||
| Thermotogales bacterium TBF 19.5.1 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| iolR |
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Thermotoga maritima MSB8 Site: position = -39 score = 6.01228 sequence = GTTGGTTAGTTAACGATAACAAA Gene: TM0411: Regulator of myo-inositol utilization InoR, ROK family |
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Thermotoga neapolitana DSM 4359 Site: position = -40 score = 6.25205 sequence = GTTGGTTAGTAAATGAAAACAAA Gene: CTN_0258: Regulator of myo-inositol utilization InoR, ROK family |
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Thermotoga petrophila RKU-1 Site: position = -40 score = 6.25205 sequence = GTTGGTTAGTAAATGAAAACAAA Gene: Tpet_0509: Regulator of myo-inositol utilization InoR, ROK family |
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Thermotoga naphthophila RKU-10 Site: position = -40 score = 6.25205 sequence = GTTGGTTAGTAAATGAAAACAAA Gene: Tnap_0203: Regulator of myo-inositol utilization InoR, ROK family |
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Regulator of myo-inositol utilization InoR, ROK family |
| iolM |
Gene: TM0412: Inosose dehydrogenase |
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Gene: CTN_0257: Inosose dehydrogenase |
Gene: Tpet_0508: Inosose dehydrogenase |
Gene: Tnap_0204: Inosose dehydrogenase |
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Inosose dehydrogenase |
| iolN |
Gene: TM0413: Keto-inosose hydrolase |
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Gene: CTN_0256: Keto-inosose hydrolase |
Gene: Tpet_0507: Keto-inosose hydrolase |
Gene: Tnap_0205: Keto-inosose hydrolase |
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Keto-inosose hydrolase |
| iolG |
Gene: TM0414: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
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Gene: CTN_0255: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
Gene: Tpet_0506: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
Gene: Tnap_0206: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
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Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
| iolK |
Gene: TM0415: Novel inositol-related kinase, PfkB family (EC 2.7.1.12) |
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Gene: CTN_0254: Novel inositol-related kinase, PfkB family (EC 2.7.1.12) |
Gene: Tpet_0505: Novel inositol-related kinase, PfkB family (EC 2.7.1.12) |
Gene: Tnap_0207: Novel inositol-related kinase, PfkB family (EC 2.7.1.12) |
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Novel inositol-related kinase, PfkB family (EC 2.7.1.12) |
| iolO |
Gene: TM0416: 5-keto-L-gluconate epimerase |
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Gene: CTN_0253: 5-keto-L-gluconate epimerase |
Gene: Tpet_0504: 5-keto-L-gluconate epimerase |
Gene: Tnap_0208: 5-keto-L-gluconate epimerase |
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5-keto-L-gluconate epimerase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |