Regulog HutC - Alteromonadales

Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
Genome | Genes | Operons |
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Pseudoalteromonas atlantica T6c | 5 | 2 |
Pseudoalteromonas haloplanktis TAC125 | 4 | 2 |
Pseudoalteromonas tunicata D2 | 2 | 2 |
Idiomarina loihiensis L2TR | 12 | 3 |
Idiomarina baltica OS145 | 4 | 2 |
Alteromonas macleodii 'Deep ecotype' | 5 | 2 |
Alteromonadales bacterium TW-7 | 4 | 2 |
Colwellia psychrerythraea 34H | 17 | 5 |
Glaciecola sp. HTCC2999 |
Genes | Function | |||||||||
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CRON 1. | ||||||||||
hutI |
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Pseudoalteromonas atlantica T6c Site: position = -50 score = 5.67686 sequence = ATACAAGTATGTACAAGTAA Site: position = -60 score = 6.51905 sequence = AAACTTGTATATACAAGTAT Gene: Patl_1019: Imidazolonepropionase (EC 3.5.2.7) |
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Pseudoalteromonas haloplanktis TAC125 Site: position = -70 score = 5.32919 sequence = TACCTTGTATATACAAGATG Gene: PSHAa2737: Imidazolonepropionase (EC 3.5.2.7) |
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Pseudoalteromonas tunicata D2 Site: position = -68 score = 5.06762 sequence = AGTATTGTATATACAAGCCG Gene: PTD2_07454: Imidazolonepropionase (EC 3.5.2.7) |
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Idiomarina loihiensis L2TR Site: position = -62 score = 6.12134 sequence = ATAATTGTATATACAAGCAG Gene: IL2453: Imidazolonepropionase (EC 3.5.2.7) |
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Idiomarina baltica OS145 Site: position = -77 score = 4.34636 sequence = TCATTTGTCTATACAACCTG Gene: OS145_09068: Imidazolonepropionase (EC 3.5.2.7) |
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Alteromonas macleodii 'Deep ecotype' Site: position = -101 score = 6.74667 sequence = ATACTTGTATATACAAGTAT Site: position = -91 score = 4.87724 sequence = ATACAAGTATGCACAAGTAC Gene: MADE_03129: Imidazolonepropionase (EC 3.5.2.7) |
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Alteromonadales bacterium TW-7 Site: position = -69 score = 4.7575 sequence = CCTCTTGTATATACAAGATG Gene: ATW7_17853: Imidazolonepropionase (EC 3.5.2.7) |
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Colwellia psychrerythraea 34H Site: position = -153 score = 5.49192 sequence = AGAGTTGTATATACAAGTTG Gene: CPS_0911: Imidazolonepropionase (EC 3.5.2.7) |
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Imidazolonepropionase (EC 3.5.2.7) |
hutG2 |
Gene: Patl_1018: Formiminoglutamase (EC 3.5.3.8) |
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Gene: MADE_03130: Formiminoglutamase (EC 3.5.3.8) |
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Formiminoglutamase (EC 3.5.3.8) |
CRON 2. | ||||||||||
hisG |
Gene: Patl_2880: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: PSHAb0494: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: PTD2_02256: ATP phosphoribosyltransferase (EC 2.4.2.17) |
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Idiomarina loihiensis L2TR Site: position = -301 score = 4.37103 sequence = TTATTTGACTATACAACCAC Gene: IL1834: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: OS145_10250: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: MADE_01118: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: ATW7_00290: ATP phosphoribosyltransferase (EC 2.4.2.17) |
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Colwellia psychrerythraea 34H Site: position = -54 score = 5.00432 sequence = TAAATTGTATATACATGACG Gene: CPS_3889: ATP phosphoribosyltransferase (EC 2.4.2.17) |
Gene: GHTCC_010100009696: ATP phosphoribosyltransferase (EC 2.4.2.17) |
ATP phosphoribosyltransferase (EC 2.4.2.17) |
hisD |
Gene: Patl_2881: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: PSHAb0493: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: PTD2_02261: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: IL1835: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: OS145_10245: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: MADE_01117: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: ATW7_00285: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: CPS_3890: Histidinol dehydrogenase (EC 1.1.1.23) |
Gene: GHTCC_010100009701: Histidinol dehydrogenase (EC 1.1.1.23) |
Histidinol dehydrogenase (EC 1.1.1.23) |
hisC |
Gene: Patl_2882: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: PSHAb0492: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: PTD2_02266: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: IL1836: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: OS145_10240: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: MADE_01116: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: ATW7_00280: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: CPS_3891: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Gene: GHTCC_010100009706: Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
Histidinol-phosphate aminotransferase (EC 2.6.1.9) |
hisB |
Gene: Patl_2883: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: PSHAb0491: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: PTD2_02271: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: IL1837: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: OS145_10235: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: MADE_01115: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: ATW7_00275: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: CPS_3892: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Gene: GHTCC_010100009711: Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) |
hisH |
Gene: Patl_2884: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: PSHAb0490: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: PTD2_02276: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: IL1838: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: OS145_10230: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: MADE_01114: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: ATW7_00270: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: CPS_3893: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Gene: GHTCC_010100009716: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) |
hisA |
Gene: Patl_2885: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: PSHAb0489: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: PTD2_02281: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: IL1839: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: OS145_10225: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: MADE_01113: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: ATW7_00265: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: CPS_3894: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Gene: GHTCC_010100009721: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) |
hisF |
Gene: Patl_2887: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: PSHAb0483: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: PTD2_02286: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: IL1840: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: OS145_10220: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: MADE_01112: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: ATW7_00260: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: CPS_3895: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Gene: GHTCC_010100009726: Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) |
hisI |
Gene: Patl_2888: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: PSHAb0482: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: PTD2_02291: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: IL1841: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: OS145_10215: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
2
Alteromonas macleodii 'Deep ecotype' Gene: MADE_01111: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Gene: MADE_02956: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: ATW7_00255: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: CPS_3896: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Gene: GHTCC_010100009731: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) |
CRON 3. | ||||||||||
hutC |
*
Pseudoalteromonas atlantica T6c Site: position = -66 score = 5.67686 sequence = TTACTTGTACATACTTGTAT Site: position = -56 score = 6.51905 sequence = ATACTTGTATATACAAGTTT Gene: Patl_1020: Histidine utilization repressor, GntR family |
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Pseudoalteromonas haloplanktis TAC125 Site: position = -70 score = 5.32919 sequence = CATCTTGTATATACAAGGTA Gene: PSHAa2738: Histidine utilization repressor, GntR family |
*
Pseudoalteromonas tunicata D2 Site: position = -69 score = 5.06762 sequence = CGGCTTGTATATACAATACT Gene: PTD2_07449: Histidine utilization repressor, GntR family |
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Idiomarina loihiensis L2TR Site: position = -81 score = 6.12134 sequence = CTGCTTGTATATACAATTAT Gene: IL2452: Histidine utilization repressor, GntR family |
*
Idiomarina baltica OS145 Site: position = -70 score = 4.34636 sequence = CAGGTTGTATAGACAAATGA Gene: OS145_09063: Histidine utilization repressor, GntR family |
*
Alteromonas macleodii 'Deep ecotype' Site: position = -89 score = 4.87724 sequence = GTACTTGTGCATACTTGTAT Site: position = -79 score = 6.74667 sequence = ATACTTGTATATACAAGTAT Gene: MADE_03128: Histidine utilization repressor, GntR family |
*
Alteromonadales bacterium TW-7 Site: position = -71 score = 4.7575 sequence = CATCTTGTATATACAAGAGG Gene: ATW7_17848: Histidine utilization repressor, GntR family |
*
Colwellia psychrerythraea 34H Site: position = -80 score = 5.49192 sequence = CAACTTGTATATACAACTCT Gene: CPS_0910: Histidine utilization repressor, GntR family |
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Histidine utilization repressor, GntR family |
hutU |
Gene: Patl_1021: Urocanate hydratase (EC 4.2.1.49) |
Gene: PSHAa2739: Urocanate hydratase (EC 4.2.1.49) |
Gene: PTD2_14952: Urocanate hydratase (EC 4.2.1.49) |
Gene: IL2451: Urocanate hydratase (EC 4.2.1.49) |
Gene: OS145_09058: Urocanate hydratase (EC 4.2.1.49) |
Gene: MADE_03127: Urocanate hydratase (EC 4.2.1.49) |
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Alteromonadales bacterium TW-7 Site: position = -28 score = 4.29997 sequence = CACCTTGTATATACAACAGG Gene: ATW7_17843: Urocanate hydratase (EC 4.2.1.49) |
Gene: CPS_0909: Urocanate hydratase (EC 4.2.1.49) |
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Urocanate hydratase (EC 4.2.1.49) |
hutH |
Gene: Patl_1022: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: PSHAa2740: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: PTD2_14947: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: IL2450: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: OS145_09053: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: MADE_03126: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: ATW7_17838: Histidine ammonia-lyase (EC 4.3.1.3) |
Gene: CPS_0908: Histidine ammonia-lyase (EC 4.3.1.3) |
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Histidine ammonia-lyase (EC 4.3.1.3) |
CRON 4. | ||||||||||
hutX |
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Colwellia psychrerythraea 34H Site: position = -192 score = 3.84154 sequence = GAGCGGGTATATACATAAAT Gene: CPS_4933: Amino acid ABC transporter, periplasmic amino acid-binding protein |
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Amino acid ABC transporter, periplasmic amino acid-binding protein |
hutW |
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Gene: CPS_4934: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) |
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L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) |
hutV |
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Gene: CPS_4935: L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) |
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L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) |
CRON 5. | ||||||||||
hutG |
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Colwellia psychrerythraea 34H Site: position = -46 score = 5.1136 sequence = CAAGTTGTATATACAATTTG Gene: CPS_4353: N-formylglutamate deformylase (EC 3.5.1.68) |
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N-formylglutamate deformylase (EC 3.5.1.68) |
hutF |
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Gene: CPS_4352: Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
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Formiminoglutamic iminohydrolase (EC 3.5.3.13) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |