Regulog GntR - Bifidobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By effector - Gluconate
- By pathway - Gluconate utilization
| Genome | Genes | Operons |
|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 | ||
| Bifidobacterium adolescentis ATCC 15703 | ||
| Bifidobacterium angulatum DSM 20098 | ||
| Bifidobacterium animalis subsp. lactis AD011 | ||
| Bifidobacterium bifidum NCIMB 41171 | ||
| Bifidobacterium breve DSM 20213 | ||
| Bifidobacterium dentium Bd1 | 3 | 2 |
| Bifidobacterium gallicum DSM 20093 | ||
| Bifidobacterium longum NCC2705 | ||
| Gardnerella vaginalis 409-05 |
| Genes | Function | ||||||||||
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| CRON 1. | |||||||||||
| idnO |
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Bifidobacterium dentium Bd1 Site: position = -91 score = 7.42686 sequence = TAGGGGTATCGATACACCTA Gene: BDP_1687: Gluconate 5-dehydrogenase (EC 1.1.1.69) |
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Gluconate 5-dehydrogenase (EC 1.1.1.69) |
| gntP |
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Gene: BDP_1688: Gluconate permease |
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Gluconate permease |
| CRON 2. | |||||||||||
| gntR |
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Bifidobacterium dentium Bd1 Site: position = -177 score = 7.42686 sequence = TAGGTGTATCGATACCCCTA Gene: BDP_1686: Transcriptional regulator for gluconate utilization, LacI family |
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Transcriptional regulator for gluconate utilization, LacI family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |