Regulog ArsR - Nocardiaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Arsenic resistance |
| Effector: | Arsenite; Arsenate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By TF family - ArsR
- By effector - Arsenite
- By effector - Arsenate
- By pathway - Arsenic resistance
| Genome | Genes | Operons |
|---|---|---|
| Nocardia farcinica IFM 10152 | 8 | 2 |
| Rhodococcus erythropolis PR4 | 11 | 2 |
| Rhodococcus opacus B4 | 10 | 2 |
| Rhodococcus sp. RHA1 | 3 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| arsR |
*2
Nocardia farcinica IFM 10152 Site: position = -13 score = 6.46324 sequence = TCAATATCGATGCATGTCTA Gene: nfa24490: Arsenical resistance operon repressor, ArsR family Site: position = -13 score = 6.75266 sequence = TCAATATTGGCGTATGTCGA Gene: pnf2240: Arsenical resistance operon repressor, ArsR family |
*2
Rhodococcus erythropolis PR4 Site: position = -13 score = 6.90937 sequence = TCAATATCGAAGAATGTCGA Gene: RER_35210: Arsenical resistance operon repressor, ArsR family Site: position = -28 score = 6.92377 sequence = TCAATATTGATGTATGTCGA Gene: pREL1_0158: Arsenical resistance operon repressor, ArsR family |
*2
Rhodococcus opacus B4 Site: position = -13 score = 7.12383 sequence = TCAATATCGACGCATGTCGA Gene: ROP_29950: Arsenical resistance operon repressor, ArsR family Site: position = -13 score = 7.18905 sequence = TCAATATCGACGTATGTCGA Gene: ROP_00150: Arsenical resistance operon repressor, ArsR family |
*
Rhodococcus sp. RHA1 Site: position = -13 score = 7.12383 sequence = TCAATATCGACGCATGTCGA Gene: RHA1_ro03367: Arsenical resistance operon repressor, ArsR family |
Arsenical resistance operon repressor, ArsR family |
| arsB |
2
Nocardia farcinica IFM 10152 Gene: pnf2250: Arsenate reductase (EC 1.20.4.1) Gene: nfa24500: Arsenate reductase (EC 1.20.4.1) |
2
Rhodococcus erythropolis PR4 Gene: RER_35200: Arsenate reductase (EC 1.20.4.1) Gene: pREL1_0159: Arsenate reductase (EC 1.20.4.1) |
2
Rhodococcus opacus B4 Gene: ROP_00160: Arsenate reductase (EC 1.20.4.1) Gene: ROP_29960: Arsenate reductase (EC 1.20.4.1) |
Gene: RHA1_ro03368: Arsenate reductase (EC 1.20.4.1) |
Arsenate reductase (EC 1.20.4.1) |
| arsC |
4
Nocardia farcinica IFM 10152 Gene: pnf2280: Arsenate reductase (EC 1.20.4.1) Gene: nfa24510: Arsenate reductase (EC 1.20.4.1) Gene: pnf2260: Arsenate reductase (EC 1.20.4.1) Gene: pnf2270: Arsenate reductase (EC 1.20.4.1) |
3
Rhodococcus erythropolis PR4 Gene: RER_35190: Arsenate reductase (EC 1.20.4.1) Gene: pREL1_0162: Arsenate reductase (EC 1.20.4.1) Gene: pREL1_0160: Arsenate reductase (EC 1.20.4.1) |
4
Rhodococcus opacus B4 Gene: ROP_00180: Arsenate reductase (EC 1.20.4.1) Gene: ROP_00190: Arsenate reductase (EC 1.20.4.1) Gene: ROP_00170: Arsenate reductase (EC 1.20.4.1) Gene: ROP_29970: Arsenate reductase (EC 1.20.4.1) |
Gene: RHA1_ro03369: Arsenate reductase (EC 1.20.4.1) |
Arsenate reductase (EC 1.20.4.1) |
| trxB |
|
Gene: pREL1_0161: Thioredoxin reductase (EC 1.8.1.9) |
|
|
Thioredoxin reductase (EC 1.8.1.9) |
| pREL1_0163 |
|
Gene: pREL1_0163: Monooxygenase, putative |
|
|
Monooxygenase, putative |
| arsD |
|
Gene: pREL1_0164: Arsenical resistance operon trans-acting repressor arsD |
Gene: ROP_00200: Arsenical resistance operon trans-acting repressor arsD |
|
Arsenical resistance operon trans-acting repressor arsD |
| arsA |
|
Gene: pREL1_0165: Arsenical pump-driving ATPase (EC 3.6.3.16) |
Gene: ROP_00210: Arsenical pump-driving ATPase (EC 3.6.3.16) |
|
Arsenical pump-driving ATPase (EC 3.6.3.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |