Regulog Fjoh_4822 - Flavobacteria

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Flavobacteria
By TF family - GntR/MocR
By pathway - Metabolite transport

Statistics of regulated genes
Genome	Genes	Operons
Candidatus Sulcia muelleri SMDSEM
Blattabacterium sp. (Blattella germanica) str. Bge
Capnocytophaga ochracea DSM 7271
Cellulophaga sp. MED134
Croceibacter atlanticus HTCC2559
Flavobacterium psychrophilum JIP02/86
Flavobacterium johnsoniae UW101	1	1
Flavobacteriales bacterium HTCC2170	1	1
Flavobacteriales bacterium ALC-1
Flavobacteriaceae bacterium 3519-10
Flavobacteria bacterium BBFL7
Flavobacteria bacterium BAL38	1	1
Kordia algicida OT-1
Gramella forsetii KT0803
Polaribacter irgensii 23-P	1	1
Leeuwenhoekiella blandensis MED217
Tenacibaculum sp. MED152	1	1
Robiginitalea biformata HTCC2501
Psychroflexus torquis ATCC 700755

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																				Function

CRON 1.
omp	Candidatus Sulcia muelleri SMDSEM	Blattabacterium sp. (Blattella germanica) str. Bge	Capnocytophaga ochracea DSM 7271	Cellulophaga sp. MED134	Croceibacter atlanticus HTCC2559	Flavobacterium psychrophilum JIP02/86	* Flavobacterium johnsoniae UW101 Site: position = -81 score = 13.2317 sequence = AACCGGACCAC-(12)-AACTGGTATAC-(4)-TTAGTACGGCA Gene: Fjoh_4821: TonB-dependent receptor domain protein, putative outer membrane transporter	* Flavobacteriales bacterium HTCC2170 Site: position = -112 score = 14.9027 sequence = AACCGGACTAT-(12)-AACTGGACTAG-(4)-ATCGTCCGGAA Gene: FB2170_07439: TonB-dependent receptor domain protein, putative outer membrane transporter	Flavobacteriales bacterium ALC-1	Flavobacteriaceae bacterium 3519-10	Flavobacteria bacterium BBFL7	* Flavobacteria bacterium BAL38 Site: position = -86 score = 14.159 sequence = AACCGGACTAT-(12)-ATCTGGACTAT-(4)-GTAGTCCGGAA Gene: FBBAL38_06300: TonB-dependent receptor domain protein, putative outer membrane transporter	Kordia algicida OT-1	Gramella forsetii KT0803	* Polaribacter irgensii 23-P Site: position = -93 score = 14.7027 sequence = AACCGGACTAT-(12)-AACTGGACTAG-(4)-GTCGTCCGGAA Gene: PI23P_03222: TonB-dependent receptor domain protein, putative outer membrane transporter	Leeuwenhoekiella blandensis MED217	* Tenacibaculum sp. MED152 Site: position = -85 score = 11.4289 sequence = AAGTGGACTAT-(12)-AACCGGACTAT-(4)-AGCGCTTGTAA Gene: MED152_06570: TonB-dependent receptor domain protein, putative outer membrane transporter	Robiginitalea biformata HTCC2501	Psychroflexus torquis ATCC 700755	TonB-dependent receptor domain protein, putative outer membrane transporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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