Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing omp gene

Properties
Regulog: Fjoh_4822 - Flavobacteria
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Metabolite transport
Effector:
Phylum: Bacteroidetes
Built upon 5 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Flavobacteria bacterium BAL38
Position: -86
Score: 14.159
Sequence: AACCGGACTAT-(12)-ATCTGGACTAT-(4)-GTAGTCCGGAA
Locus tag: FBBAL38_06300
Name: omp
Funciton: TonB-dependent receptor domain protein, putative outer membrane transporter
omp -86 14.2 AACCGGACTAT-(12)-ATCTGGACTAT-(4)-GTAGTCCGGAA FBBAL38_06300
Flavobacteriales bacterium HTCC2170
Position: -112
Score: 14.9027
Sequence: AACCGGACTAT-(12)-AACTGGACTAG-(4)-ATCGTCCGGAA
Locus tag: FB2170_07439
Name: omp
Funciton: TonB-dependent receptor domain protein, putative outer membrane transporter
omp -112 14.9 AACCGGACTAT-(12)-AACTGGACTAG-(4)-ATCGTCCGGAA FB2170_07439
Flavobacterium johnsoniae UW101
Position: -81
Score: 13.2317
Sequence: AACCGGACCAC-(12)-AACTGGTATAC-(4)-TTAGTACGGCA
Locus tag: Fjoh_4821
Name: omp
Funciton: TonB-dependent receptor domain protein, putative outer membrane transporter
omp -81 13.2 AACCGGACCAC-(12)-AACTGGTATAC-(4)-TTAGTACGGCA Fjoh_4821
Polaribacter irgensii 23-P
Position: -93
Score: 14.7027
Sequence: AACCGGACTAT-(12)-AACTGGACTAG-(4)-GTCGTCCGGAA
Locus tag: PI23P_03222
Name: omp
Funciton: TonB-dependent receptor domain protein, putative outer membrane transporter
omp -93 14.7 AACCGGACTAT-(12)-AACTGGACTAG-(4)-GTCGTCCGGAA PI23P_03222
Tenacibaculum sp. MED152
Position: -85
Score: 11.4289
Sequence: AAGTGGACTAT-(12)-AACCGGACTAT-(4)-AGCGCTTGTAA
Locus tag: MED152_06570
Name: omp
Funciton: TonB-dependent receptor domain protein, putative outer membrane transporter
omp -85 11.4 AAGTGGACTAT-(12)-AACCGGACTAT-(4)-AGCGCTTGTAA MED152_06570