Regulog PdxR2 - Deinococcus-Thermus

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Deinococcus-Thermus
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Deinococcus deserti VCD115	2	1
Deinococcus geothermalis DSM 11300
Deinococcus radiodurans R1
Thermus aquaticus Y51MC23
Thermus thermophilus HB27

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes						Function

CRON 1.
PF00583	* Deinococcus deserti VCD115 Site: position = -68 score = 10.7374 sequence = ATTGGTTGGT-(14)-ATTGGATCTT-(4)-ACTGACCAAT Gene: Deide_3p01050: GCN5-related N-acetyltransferase (GNAT) domain	Deinococcus geothermalis DSM 11300	Deinococcus radiodurans R1	Thermus aquaticus Y51MC23	Thermus thermophilus HB27	GCN5-related N-acetyltransferase (GNAT) domain
pdxO	Deinococcus deserti VCD115 Gene: Deide_3p01040: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Deinococcus geothermalis DSM 11300	Deinococcus radiodurans R1	Thermus aquaticus Y51MC23	Thermus thermophilus HB27	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --