Regulog PdxR2 - Nocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Nocardia farcinica IFM 10152	1	1
Rhodococcus erythropolis PR4	1	1
Rhodococcus opacus B4	1	1
Rhodococcus sp. RHA1	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
pdxO	* Nocardia farcinica IFM 10152 Site: position = -67 score = 13.3212 sequence = ATTGGCCTGT-(14)-ATTGGCCCTT-(3)-TCATGCCACT Gene: nfa50150: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Rhodococcus erythropolis PR4 Site: position = -68 score = 12.8996 sequence = AGTGGCCTAT-(14)-ATTGGACCAT-(4)-TGAAGCCACT Gene: RER_58490: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Rhodococcus opacus B4 Site: position = -24 score = 11.1413 sequence = ACTGGTCTGC-(13)-TGTGGATCTG-(4)-CCGAACCACA Gene: ROP_09560: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	* Rhodococcus sp. RHA1 Site: position = -66 score = 10.7247 sequence = ACTGGTCTGT-(13)-TGTGGATCTG-(4)-ATGATCCACA Gene: RHA1_ro01234: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --