Regulog TrpR - Chlamydiales
| Regulator type: | Transcription factor |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Tryptophan biosynthesis |
| Effector: | Tryptophan |
| Phylum: | Chlamydiae |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - TrpR
- By taxonomy - Chlamydiales
- By TF family - TrpR
- By effector - Tryptophan
- By pathway - Tryptophan biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Chlamydia muridarum Nigg | ||
| Chlamydia trachomatis D/UW-3/CX | 3 | 1 |
| Chlamydophila abortus S26/3 | ||
| Chlamydophila caviae GPIC | 8 | 1 |
| Chlamydophila felis Fe/C-56 | 8 | 1 |
| Chlamydophila pneumoniae AR39 | ||
| Parachlamydia sp. UWE25 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| trpR |
|
*
Chlamydia trachomatis D/UW-3/CX Site: position = -32 score = 6.78541 sequence = TGTAATATTATAGCATTACA Gene: CT169: trp operon repressor |
|
*
Chlamydophila caviae GPIC Site: position = -39 score = 7.04324 sequence = TGTAATGCTGTAGCATTACA Gene: CCA00562: trp operon repressor |
*
Chlamydophila felis Fe/C-56 Site: position = -39 score = 6.66994 sequence = TGTACTGCTGTAACATTACA Gene: CF0440: trp operon repressor |
|
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trp operon repressor |
| trpD |
|
|
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Gene: CCA00563: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
Gene: CF0439: Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
|
|
Anthranilate phosphoribosyltransferase (EC 2.4.2.18) |
| trpC |
|
|
|
Gene: CCA00564: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
Gene: CF0438: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
|
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Indole-3-glycerol phosphate synthase (EC 4.1.1.48) |
| trpF |
|
|
|
Gene: CCA00565: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
Gene: CF0437: Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
|
|
Phosphoribosylanthranilate isomerase (EC 5.3.1.24) |
| trpB |
|
Gene: CT170: Tryptophan synthase beta chain (EC 4.2.1.20) |
|
Gene: CCA00566: Tryptophan synthase beta chain (EC 4.2.1.20) |
Gene: CF0436: Tryptophan synthase beta chain (EC 4.2.1.20) |
|
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Tryptophan synthase beta chain (EC 4.2.1.20) |
| trpA |
|
Gene: CT171: Tryptophan synthase alpha chain (EC 4.2.1.20) |
|
Gene: CCA00567: Tryptophan synthase alpha chain (EC 4.2.1.20) |
Gene: CF0435: Tryptophan synthase alpha chain (EC 4.2.1.20) |
|
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Tryptophan synthase alpha chain (EC 4.2.1.20) |
| kynU |
|
|
|
Gene: CCA00568: Kynureninase (EC 3.7.1.3) |
Gene: CF0434: Kynureninase (EC 3.7.1.3) |
|
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Kynureninase (EC 3.7.1.3) |
| prsA |
|
|
|
Gene: CCA00569: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) |
Gene: CF0433: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) |
|
Gene: pc1595: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) |
Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |