Regulog BirA - Deinococcus-Thermus

Properties
Regulator type:	Transcription factor
Regulator family:	BirA
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:	Biotin
Phylum:	Deinococcus-Thermus
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Deinococcus deserti VCD115
Deinococcus geothermalis DSM 11300
Deinococcus radiodurans R1
Thermus aquaticus Y51MC23	1	1
Thermus thermophilus HB27	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes						Function

CRON 1.
bioB	Deinococcus deserti VCD115	Deinococcus geothermalis DSM 11300	Deinococcus radiodurans R1	Thermus aquaticus Y51MC23	* Thermus thermophilus HB27 Site: position = -35 score = 9.24497 sequence = TCGTAAACT-(15)-GGTTTACGA Gene: TTC0242: Biotin synthase (EC 2.8.1.6)	Biotin synthase (EC 2.8.1.6)

CRON 2.
bioY	Deinococcus deserti VCD115 Gene: Deide_19460: Substrate-specific component BioY of biotin ECF transporter	Deinococcus geothermalis DSM 11300 Gene: Dgeo_2139: Substrate-specific component BioY of biotin ECF transporter	Deinococcus radiodurans R1	* Thermus aquaticus Y51MC23 Site: position = -61 score = 9.39662 sequence = CCGTCAACC-(15)-GGTTGACGA Gene: TaqDRAFT_5371: Substrate-specific component BioY of biotin ECF transporter	* Thermus thermophilus HB27 Site: position = -97 score = 9.39662 sequence = ACGTCAACC-(15)-GGTTGACGA Gene: TTC0548: Substrate-specific component BioY of biotin ECF transporter	Substrate-specific component BioY of biotin ECF transporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --