Regulog BirA - Thermoanaerobacterales
| Regulator type: | Transcription factor |
| Regulator family: | BirA |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - BirA
- By taxonomy - Thermoanaerobacterales
- By TF family - BirA
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Anaerocellum thermophilum DSM 6725 | 5 | 3 |
| Caldicellulosiruptor saccharolyticus DSM 8903 | 5 | 3 |
| Carboxydothermus hydrogenoformans Z-2901 | 2 | 2 |
| Moorella thermoacetica ATCC 39073 | ||
| Thermoanaerobacter ethanolicus X514 | 1 | 1 |
| Thermoanaerobacter italicus Ab9 | 1 | 1 |
| Thermoanaerobacter tengcongensis MB4 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| bioY3 |
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Anaerocellum thermophilum DSM 6725 Site: position = -103 score = 8.46559 sequence = TAGTAAAC-(16)-GTTGACAA Gene: Athe_2544: Substrate-specific component BioY of biotin ECF transporter |
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Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -73 score = 7.60273 sequence = TAGTAAAC-(16)-GTTGACAT Gene: Csac_0304: Substrate-specific component BioY of biotin ECF transporter |
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Substrate-specific component BioY of biotin ECF transporter |
| bioD |
Gene: Athe_2543: Dethiobiotin synthetase (EC 6.3.3.3) |
Gene: Csac_0305: Dethiobiotin synthetase (EC 6.3.3.3) |
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Dethiobiotin synthetase (EC 6.3.3.3) |
| bioA |
Gene: Athe_2542: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) |
Gene: Csac_0306: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) |
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Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) |
| CRON 2. | ||||||||
| bioB |
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Anaerocellum thermophilum DSM 6725 Site: position = -88 score = 7.619 sequence = ATGTAAAC-(16)-GTTTACTA Gene: Athe_2541: Biotin synthase (EC 2.8.1.6) |
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Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -102 score = 6.34227 sequence = CAGTAAAT-(16)-GTTTACTA Gene: Csac_0307: Biotin synthase (EC 2.8.1.6) |
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Carboxydothermus hydrogenoformans Z-2901 Site: position = -83 score = 8.95224 sequence = TTGTTAAC-(15)-GTTGACAA Gene: CHY_0889: Biotin synthase (EC 2.8.1.6) |
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Biotin synthase (EC 2.8.1.6) |
| CRON 3. | ||||||||
| bioY2 |
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Anaerocellum thermophilum DSM 6725 Site: position = -47 score = 7.619 sequence = TAGTAAAC-(15)-GTTTACAT Gene: Athe_2725: Substrate-specific component BioY of biotin ECF transporter |
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Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -48 score = 7.03665 sequence = TAGTAAAC-(16)-GTTTACTT Gene: Csac_0198: Substrate-specific component BioY of biotin ECF transporter |
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Carboxydothermus hydrogenoformans Z-2901 Site: position = -15 score = 7.23314 sequence = AGGTTAAC-(15)-GTTGACAA Gene: CHY_1642: Substrate-specific component BioY of biotin ECF transporter |
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Substrate-specific component BioY of biotin ECF transporter |
| CRON 4. | ||||||||
| bioY1 |
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Gene: Moth_0144: Substrate-specific component BioY of biotin ECF transporter |
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Thermoanaerobacter ethanolicus X514 Site: position = -86 score = 8.95224 sequence = TTGTTAAC-(15)-GTTGACAA Gene: Teth514_2213: Substrate-specific component BioY of biotin ECF transporter |
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Thermoanaerobacter italicus Ab9 Site: position = -86 score = 8.95224 sequence = TTGTTAAC-(15)-GTTGACAA Gene: Thit_0733: Substrate-specific component BioY of biotin ECF transporter |
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Thermoanaerobacter tengcongensis MB4 Site: position = -88 score = 8.36989 sequence = TAGTTAAC-(15)-GTTGACAA Gene: TTE0777: Substrate-specific component BioY of biotin ECF transporter |
Substrate-specific component BioY of biotin ECF transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |