Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NrdR - Streptomycetaceae

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptomyces avermitilis MA-4680 4 2
Streptomyces coelicolor A3(2) 4 2
Streptomyces griseus subsp. griseus NBRC 13350 4 2
Streptomyces scabiei 87.22 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdR
*
Streptomyces avermitilis MA-4680

Site:
position = -156
score = 5.01347
sequence = GCCCCACATCTAGTGG

Site:
position = -125
score = 3.68275
sequence = AGCCCACAAGTTGTGG

Gene: SAV_2462: Ribonucleotide reductase transcriptional regulator NrdR
*
Streptomyces coelicolor A3(2)

Site:
position = -156
score = 4.82447
sequence = TCCCCACATCTAGTGG

Site:
position = -125
score = 3.68275
sequence = AGCCCACAAGTTGTGG

Gene: SCO5804: Ribonucleotide reductase transcriptional regulator NrdR
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -159
score = 5.23173
sequence = ACCCTAGATCTAGTGG

Site:
position = -128
score = 3.80128
sequence = CGCCCAGAAGTTGTGG

Gene: SGR_1716: Ribonucleotide reductase transcriptional regulator NrdR
*
Streptomyces scabiei 87.22

Site:
position = -155
score = 5.02201
sequence = GCCCTACATGTAGTGC

Site:
position = -124
score = 3.65158
sequence = AGCCCAGAAGTTGTGG

Gene: SCAB_24641: Ribonucleotide reductase transcriptional regulator NrdR
Ribonucleotide reductase transcriptional regulator NrdR
nrdJ
 
Streptomyces avermitilis MA-4680

Gene: SAV_2461: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Streptomyces coelicolor A3(2)

Gene: SCO5805: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_1715: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
Streptomyces scabiei 87.22

Gene: SCAB_24631: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
 
CRON 2.
nrdA
*
Streptomyces avermitilis MA-4680

Site:
position = -275
score = 3.47957
sequence = GCACAAGATGTATGCT

Site:
position = -306
score = 4.92495
sequence = ACACAAGATGTGGGGG

Gene: SAV_3026: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Streptomyces coelicolor A3(2)

Site:
position = -314
score = 4.92495
sequence = ACACAACATCTGGGGG

Site:
position = -283
score = 3.47957
sequence = GCACAAGATGTATGCT

Gene: SCO5226: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Streptomyces griseus subsp. griseus NBRC 13350

Site:
position = -303
score = 4.95613
sequence = ACACAACATGTGGGGG

Site:
position = -271
score = 3.52267
sequence = CCCCCACATGTATGCT

Gene: SGR_2299: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Streptomyces scabiei 87.22

Site:
position = -300
score = 4.95613
sequence = ACACAACATGTGGGGG

Site:
position = -269
score = 3.62928
sequence = GCACTAGATGTATGCT

Gene: SCAB_30261: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdB
 
Streptomyces avermitilis MA-4680

Gene: SAV_3027: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Streptomyces coelicolor A3(2)

Gene: SCO5225: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Streptomyces griseus subsp. griseus NBRC 13350

Gene: SGR_2300: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Streptomyces scabiei 87.22

Gene: SCAB_30271: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise