Regulog NrdR - Streptomycetaceae
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NrdR
- By taxonomy - Streptomycetaceae
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces avermitilis MA-4680 | 4 | 2 |
| Streptomyces coelicolor A3(2) | 4 | 2 |
| Streptomyces griseus subsp. griseus NBRC 13350 | 4 | 2 |
| Streptomyces scabiei 87.22 | 4 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| nrdR |
*
Streptomyces avermitilis MA-4680 Site: position = -156 score = 5.01347 sequence = GCCCCACATCTAGTGG Site: position = -125 score = 3.68275 sequence = AGCCCACAAGTTGTGG Gene: SAV_2462: Ribonucleotide reductase transcriptional regulator NrdR |
*
Streptomyces coelicolor A3(2) Site: position = -156 score = 4.82447 sequence = TCCCCACATCTAGTGG Site: position = -125 score = 3.68275 sequence = AGCCCACAAGTTGTGG Gene: SCO5804: Ribonucleotide reductase transcriptional regulator NrdR |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -159 score = 5.23173 sequence = ACCCTAGATCTAGTGG Site: position = -128 score = 3.80128 sequence = CGCCCAGAAGTTGTGG Gene: SGR_1716: Ribonucleotide reductase transcriptional regulator NrdR |
*
Streptomyces scabiei 87.22 Site: position = -155 score = 5.02201 sequence = GCCCTACATGTAGTGC Site: position = -124 score = 3.65158 sequence = AGCCCAGAAGTTGTGG Gene: SCAB_24641: Ribonucleotide reductase transcriptional regulator NrdR |
Ribonucleotide reductase transcriptional regulator NrdR |
| nrdJ |
Gene: SAV_2461: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
Gene: SCO5805: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
Gene: SGR_1715: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
Gene: SCAB_24631: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) |
| CRON 2. | |||||
| nrdA |
*
Streptomyces avermitilis MA-4680 Site: position = -275 score = 3.47957 sequence = GCACAAGATGTATGCT Site: position = -306 score = 4.92495 sequence = ACACAAGATGTGGGGG Gene: SAV_3026: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
*
Streptomyces coelicolor A3(2) Site: position = -314 score = 4.92495 sequence = ACACAACATCTGGGGG Site: position = -283 score = 3.47957 sequence = GCACAAGATGTATGCT Gene: SCO5226: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -303 score = 4.95613 sequence = ACACAACATGTGGGGG Site: position = -271 score = 3.52267 sequence = CCCCCACATGTATGCT Gene: SGR_2299: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
*
Streptomyces scabiei 87.22 Site: position = -300 score = 4.95613 sequence = ACACAACATGTGGGGG Site: position = -269 score = 3.62928 sequence = GCACTAGATGTATGCT Gene: SCAB_30261: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
| nrdB |
Gene: SAV_3027: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: SCO5225: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: SGR_2300: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Gene: SCAB_30271: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |