Regulog YhcF2 - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Multidrug resistance; Multidrug efflux
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - GntR/Others
By pathway - Multidrug resistance
By pathway - Multidrug efflux

Statistics of regulated genes
Genome	Genes	Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42
Bacillus cereus ATCC 14579
Bacillus clausii KSM-K16	6	1
Bacillus halodurans C-125	4	1
Bacillus licheniformis DSM 13
Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831	4	1
Paenibacillus sp. JDR-2	5	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
BH2649	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	2 Bacillus clausii KSM-K16* Gene: ABC3134: ABC-type multidrug transport system, permease component Site: position = -43 score = 6.0797 sequence = ATGTATGAATCACTTAATACAT Site: position = -75 score = 5.16278 sequence = CTGTATCAAGCATATAGTACAC Gene: ABC3130: ABC-type multidrug transport system, permease component	Bacillus halodurans C-125 Gene: BH2649: ABC-type multidrug transport system, permease component	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831 Gene: OB0515: ABC-type multidrug transport system, permease component	Paenibacillus sp. JDR-2	ABC-type multidrug transport system, permease component
ABC3131	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3131: hypothetical protein	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	hypothetical protein
yhcF2	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3132: Transcriptional regulator, GntR family	* Bacillus halodurans C-125 Site: position = -105 score = 5.74888 sequence = CTGTATGAACCATATAATACAC Site: position = -78 score = 6.27624 sequence = CTGTATTAAAGGATTAATACGC Site: position = -42 score = 6.45572 sequence = ATGTATTAAGTTGTTAATACAC Gene: BH2647: Transcriptional regulator, GntR family	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	* Oceanobacillus iheyensis HTE831 Site: position = -96 score = 6.52796 sequence = GTGTATTAAGCATATAATACAT Site: position = -67 score = 6.60186 sequence = GTGTATTATGTGGTTAATACAC Gene: OB0513: Transcriptional regulator, GntR family	* Paenibacillus sp. JDR-2 Site: position = -38 score = 5.84549 sequence = TTGTATTACTGCCATAATACAG Gene: Pjdr2_1895: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family
BH2648	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3133: ABC-type multidrug transport system, ATPase component	Bacillus halodurans C-125 Gene: BH2648: ABC-type multidrug transport system, ATPase component	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831 Gene: OB0514: ABC-type multidrug transport system, ATPase component	Paenibacillus sp. JDR-2	ABC-type multidrug transport system, ATPase component
BH2650	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC3135: hypothetical protein	Bacillus halodurans C-125 Gene: BH2650: hypothetical protein	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831 Gene: OB0516: hypothetical protein	Paenibacillus sp. JDR-2	hypothetical protein

CRON 2.
Pjdr2_1896	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -35 score = 6.01543 sequence = TTGTATTAGTCGATTAATACAG Gene: Pjdr2_1896: hypothetical protein	hypothetical protein
Pjdr2_1897	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1897: hypothetical protein	hypothetical protein
Pjdr2_1898	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1898: hypothetical protein	hypothetical protein
Pjdr2_1899	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1899: ABC transporter related	ABC transporter related

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog YhcF2 - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --