Regulog RUMGNA_00848 - Clostridia-3

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Multidrug resistance; Multidrug efflux
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By TF family - GntR/Others
By pathway - Multidrug resistance
By pathway - Multidrug efflux

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides pectinophilus ATCC 43243	3	1
Blautia hansenii DSM 20583
Bryantella formatexigens DSM 14469
Clostridiales bacterium 1_7_47_FAA	3	1
Clostridium bolteae ATCC BAA-613
Clostridium nexile DSM 1787
Clostridium scindens ATCC 35704
Dorea formicigenerans ATCC 27755
Dorea longicatena DSM 13814
Eubacterium eligens ATCC 27750	3	1
Eubacterium rectale ATCC 33656	7	2
Roseburia intestinalis L1-82
Ruminococcus gnavus ATCC 29149	3	1
Ruminococcus lactaris ATCC 29176

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
RUMGNA_00848	* Bacteroides pectinophilus ATCC 43243 Site: position = -109 score = 6.34738 sequence = CGTACATACTGTATATAGTGTGTATATACGGATGATGCG Gene: BACPEC_02167: Transcriptional regulator, GntR family	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	* Clostridiales bacterium 1_7_47_FAA Site: position = -106 score = 5.06239 sequence = CCACATCCCATGTTATATTGTATATATACGATATATACA Site: position = -97 score = 7.45477 sequence = ATGTTATATTGTATATATACGATATATACATTATAACCA Gene: Cbac1_010100016778: Transcriptional regulator, GntR family	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Dorea formicigenerans ATCC 27755	Dorea longicatena DSM 13814	* Eubacterium eligens ATCC 27750 Site: position = 2 score = 5.55684 sequence = GGCTCTTATTTTGTATATTTTTAATAAACAGTATATAAC Gene: EUBELI_01751: Transcriptional regulator, GntR family	2 Eubacterium rectale ATCC 33656* Site: position = -58 score = 6.99018 sequence = TGTATATAGTGTATATATAACACATAAACAGTTGATAAA Site: position = -67 score = 5.82443 sequence = ACACCATGATGTATATAGTGTATATATAACACATAAACA Gene: EUBREC_2159: Transcriptional regulator, GntR family Site: position = -8 score = 5.59567 sequence = TGAATATAATGTACTTGTACGATAAGTACATTAAAGAAC Site: position = -17 score = 5.32033 sequence = CGTTTGCCTTGAATATAATGTACTTGTACGATAAGTACA Gene: EUBREC_3591: Transcriptional regulator, GntR family	Roseburia intestinalis L1-82	* Ruminococcus gnavus ATCC 29149 Site: position = -96 score = 6.74622 sequence = TTTACAAACTGTACATATTTGATATTGACAGTAATTACA Gene: RUMGNA_00848: Transcriptional regulator, GntR family	Ruminococcus lactaris ATCC 29176	Transcriptional regulator, GntR family
BH0652	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02168: ABC-type multidrug transport system, ATPase component	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100016773: ABC-type multidrug transport system, ATPase component	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Dorea formicigenerans ATCC 27755	Dorea longicatena DSM 13814	Eubacterium eligens ATCC 27750 Gene: EUBELI_01750: ABC-type multidrug transport system, ATPase component	2 Eubacterium rectale ATCC 33656 Gene: EUBREC_2158: ABC-type multidrug transport system, ATPase component Gene: EUBREC_3590: ABC-type multidrug transport system, ATPase component	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_00847: ABC-type multidrug transport system, ATPase component	Ruminococcus lactaris ATCC 29176	ABC-type multidrug transport system, ATPase component
BH0653	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02169: ABC-type multidrug transport system, permease component	Blautia hansenii DSM 20583	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100016768: ABC-type multidrug transport system, permease component	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Dorea formicigenerans ATCC 27755	Dorea longicatena DSM 13814	Eubacterium eligens ATCC 27750 Gene: EUBELI_01749: ABC-type multidrug transport system, permease component	3 Eubacterium rectale ATCC 33656 Gene: EUBREC_3589: ABC-type multidrug transport system, permease component Gene: EUBREC_2157: ABC-type multidrug transport system, permease component Gene: EUBREC_2156: ABC-type multidrug transport system, permease component	Roseburia intestinalis L1-82	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_00846: ABC-type multidrug transport system, permease component	Ruminococcus lactaris ATCC 29176	ABC-type multidrug transport system, permease component

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog RUMGNA_00848 - Clostridia-3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --