Regulog AzrR - Shewanellaceae
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - [Other]
- By effector - Paraquat
- By pathway - Superoxide stress response
| Genome | Genes | Operons |
|---|---|---|
| Shewanella oneidensis MR-1 | 3 | 2 |
| Shewanella putrefaciens CN-32 | 3 | 2 |
| Shewanella sp W3-18-1 | 3 | 2 |
| Shewanella sp ANA-3 | 3 | 2 |
| Shewanella sp MR-4 | 3 | 2 |
| Shewanella sp MR-7 | 3 | 2 |
| Shewanella baltica OS155 | 3 | 2 |
| Shewanella denitrificans OS217 | ||
| Shewanella frigidimarina NCIMB 400 | ||
| Shewanella amazonensis SB2B | 4 | 2 |
| Shewanella loihica PV-4 | 3 | 2 |
| Shewanella pealeana ATCC 700345 | 3 | 2 |
| Shewanella halifaxensis HAW-EB4 | 3 | 2 |
| Shewanella piezotolerans WP3 | 3 | 2 |
| Shewanella sediminis HAW-EB3 | 4 | 2 |
| Shewanella woodyi ATCC 51908 | 4 | 2 |
| Genes | Function | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||||
| azr |
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Shewanella oneidensis MR-1 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: SO_3585: NADPH-dependent FMN reductase |
*
Shewanella putrefaciens CN-32 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Site: position = -100 score = 5.13942 sequence = CTTTAACAGATTAAATAAAC Gene: Sputcn32_1017: NADPH-dependent FMN reductase |
*
Shewanella sp W3-18-1 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Site: position = -100 score = 5.13942 sequence = CTTTAACAGATTAAATAAAC Gene: Sputw3181_3148: NADPH-dependent FMN reductase |
*
Shewanella sp ANA-3 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: Shewana3_3177: NADPH-dependent FMN reductase |
*
Shewanella sp MR-4 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: Shewmr4_2999: NADPH-dependent FMN reductase |
*
Shewanella sp MR-7 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: Shewmr7_3080: NADPH-dependent FMN reductase |
*
Shewanella baltica OS155 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Site: position = -100 score = 5.44781 sequence = CTTTAATAGATTAAATAAAC Gene: Sbal_1010: NADPH-dependent FMN reductase |
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*
Shewanella amazonensis SB2B Site: position = -77 score = 6.65198 sequence = CTTTACATAATTAAGTAAAG Gene: Sama_2787: NADPH-dependent FMN reductase |
*
Shewanella loihica PV-4 Site: position = -63 score = 6.56807 sequence = CTTTACAAAATTAAATAAAG Gene: Shew_0914: NADPH-dependent FMN reductase |
*
Shewanella pealeana ATCC 700345 Site: position = -65 score = 5.61701 sequence = CTTTACTTTGTTTGGTAAAG Gene: Spea_0887: NADPH-dependent FMN reductase |
*
Shewanella halifaxensis HAW-EB4 Site: position = -65 score = 5.35516 sequence = CTTTACTTTGTTTTGTAAGG Gene: Shal_0939: NADPH-dependent FMN reductase |
*
Shewanella piezotolerans WP3 Site: position = -64 score = 6.31833 sequence = CTTTACTTTATTATGTAAAG Gene: swp_0891: NADPH-dependent FMN reductase |
*
Shewanella sediminis HAW-EB3 Site: position = -64 score = 6.31833 sequence = CTTTACAACATTTAGTAAAG Gene: Ssed_0994: NADPH-dependent FMN reductase |
*
Shewanella woodyi ATCC 51908 Site: position = -63 score = 5.91111 sequence = CTTTACATTACTTAGTAAAG Gene: Swoo_1047: NADPH-dependent FMN reductase |
NADPH-dependent FMN reductase |
| Sden_0935 |
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Gene: Sama_2788: Glyoxalase/dioxygenase superfamily protein |
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Gene: Ssed_0993: Glyoxalase/dioxygenase superfamily protein |
Gene: Swoo_1046: Glyoxalase/dioxygenase superfamily protein |
Glyoxalase/dioxygenase superfamily protein |
| SO3586 |
Gene: SO_3586: Glyoxalase family protein |
Gene: Sputcn32_1016: Glyoxalase family protein |
Gene: Sputw3181_3149: Glyoxalase family protein |
Gene: Shewana3_3178: Glyoxalase family protein |
Gene: Shewmr4_3000: Glyoxalase family protein |
Gene: Shewmr7_3081: Glyoxalase family protein |
Gene: Sbal_1009: Glyoxalase family protein |
Gene: Sden_2124: Glyoxalase family protein |
Gene: Sfri_1566: Glyoxalase family protein |
Gene: Sama_2789: Glyoxalase family protein |
Gene: Shew_0913: Glyoxalase family protein |
Gene: Spea_0886: Glyoxalase family protein |
Gene: Shal_0938: Glyoxalase family protein |
Gene: swp_0890: Glyoxalase family protein |
Gene: Ssed_0992: Glyoxalase family protein |
Gene: Swoo_1045: Glyoxalase family protein |
Glyoxalase family protein |
| CRON 2. | |||||||||||||||||
| azrR |
*
Shewanella oneidensis MR-1 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: SO_3584: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella putrefaciens CN-32 Site: position = -66 score = 5.13942 sequence = GTTTATTTAATCTGTTAAAG Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Sputcn32_1018: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella sp W3-18-1 Site: position = -66 score = 5.13942 sequence = GTTTATTTAATCTGTTAAAG Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Sputw3181_3147: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella sp ANA-3 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Shewana3_3176: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella sp MR-4 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Shewmr4_2998: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella sp MR-7 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Shewmr7_3079: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella baltica OS155 Site: position = -67 score = 5.44781 sequence = GTTTATTTAATCTATTAAAG Site: position = -105 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Sbal_1011: putative transcriptional regulator of azoreductase, AsnC family |
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*
Shewanella amazonensis SB2B Site: position = -106 score = 6.65198 sequence = CTTTACTTAATTATGTAAAG Gene: Sama_2786: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella loihica PV-4 Site: position = -97 score = 6.56807 sequence = CTTTATTTAATTTTGTAAAG Gene: Shew_0915: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella pealeana ATCC 700345 Site: position = -104 score = 5.61701 sequence = CTTTACCAAACAAAGTAAAG Gene: Spea_0888: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella halifaxensis HAW-EB4 Site: position = -92 score = 5.35516 sequence = CCTTACAAAACAAAGTAAAG Gene: Shal_0940: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella piezotolerans WP3 Site: position = -80 score = 6.31833 sequence = CTTTACATAATAAAGTAAAG Gene: swp_0892: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella sediminis HAW-EB3 Site: position = -99 score = 6.31833 sequence = CTTTACTAAATGTTGTAAAG Gene: Ssed_0995: putative transcriptional regulator of azoreductase, AsnC family |
*
Shewanella woodyi ATCC 51908 Site: position = -104 score = 5.91111 sequence = CTTTACTAAGTAATGTAAAG Gene: Swoo_1048: putative transcriptional regulator of azoreductase, AsnC family |
putative transcriptional regulator of azoreductase, AsnC family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |