Regulog AzrR - Shewanellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	repressor
Biological process:	Superoxide stress response
Effector:	Paraquat
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - [Other]
By effector - Paraquat
By pathway - Superoxide stress response

Statistics of regulated genes
Genome	Genes	Operons
Shewanella oneidensis MR-1	3	2
Shewanella putrefaciens CN-32	3	2
Shewanella sp W3-18-1	3	2
Shewanella sp ANA-3	3	2
Shewanella sp MR-4	3	2
Shewanella sp MR-7	3	2
Shewanella baltica OS155	3	2
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella amazonensis SB2B	4	2
Shewanella loihica PV-4	3	2
Shewanella pealeana ATCC 700345	3	2
Shewanella halifaxensis HAW-EB4	3	2
Shewanella piezotolerans WP3	3	2
Shewanella sediminis HAW-EB3	4	2
Shewanella woodyi ATCC 51908	4	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
azr	* Shewanella oneidensis MR-1 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: SO_3585: NADPH-dependent FMN reductase	* Shewanella putrefaciens CN-32 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Site: position = -100 score = 5.13942 sequence = CTTTAACAGATTAAATAAAC Gene: Sputcn32_1017: NADPH-dependent FMN reductase	* Shewanella sp W3-18-1 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Site: position = -100 score = 5.13942 sequence = CTTTAACAGATTAAATAAAC Gene: Sputw3181_3148: NADPH-dependent FMN reductase	* Shewanella sp ANA-3 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: Shewana3_3177: NADPH-dependent FMN reductase	* Shewanella sp MR-4 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: Shewmr4_2999: NADPH-dependent FMN reductase	* Shewanella sp MR-7 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Gene: Shewmr7_3080: NADPH-dependent FMN reductase	* Shewanella baltica OS155 Site: position = -62 score = 6.47589 sequence = CTTTACAAGATTAAATAAAG Site: position = -100 score = 5.44781 sequence = CTTTAATAGATTAAATAAAC Gene: Sbal_1010: NADPH-dependent FMN reductase	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	* Shewanella amazonensis SB2B Site: position = -77 score = 6.65198 sequence = CTTTACATAATTAAGTAAAG Gene: Sama_2787: NADPH-dependent FMN reductase	* Shewanella loihica PV-4 Site: position = -63 score = 6.56807 sequence = CTTTACAAAATTAAATAAAG Gene: Shew_0914: NADPH-dependent FMN reductase	* Shewanella pealeana ATCC 700345 Site: position = -65 score = 5.61701 sequence = CTTTACTTTGTTTGGTAAAG Gene: Spea_0887: NADPH-dependent FMN reductase	* Shewanella halifaxensis HAW-EB4 Site: position = -65 score = 5.35516 sequence = CTTTACTTTGTTTTGTAAGG Gene: Shal_0939: NADPH-dependent FMN reductase	* Shewanella piezotolerans WP3 Site: position = -64 score = 6.31833 sequence = CTTTACTTTATTATGTAAAG Gene: swp_0891: NADPH-dependent FMN reductase	* Shewanella sediminis HAW-EB3 Site: position = -64 score = 6.31833 sequence = CTTTACAACATTTAGTAAAG Gene: Ssed_0994: NADPH-dependent FMN reductase	* Shewanella woodyi ATCC 51908 Site: position = -63 score = 5.91111 sequence = CTTTACATTACTTAGTAAAG Gene: Swoo_1047: NADPH-dependent FMN reductase	NADPH-dependent FMN reductase
Sden_0935	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B Gene: Sama_2788: Glyoxalase/dioxygenase superfamily protein	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3	Shewanella sediminis HAW-EB3 Gene: Ssed_0993: Glyoxalase/dioxygenase superfamily protein	Shewanella woodyi ATCC 51908 Gene: Swoo_1046: Glyoxalase/dioxygenase superfamily protein	Glyoxalase/dioxygenase superfamily protein
SO3586	Shewanella oneidensis MR-1 Gene: SO_3586: Glyoxalase family protein	Shewanella putrefaciens CN-32 Gene: Sputcn32_1016: Glyoxalase family protein	Shewanella sp W3-18-1 Gene: Sputw3181_3149: Glyoxalase family protein	Shewanella sp ANA-3 Gene: Shewana3_3178: Glyoxalase family protein	Shewanella sp MR-4 Gene: Shewmr4_3000: Glyoxalase family protein	Shewanella sp MR-7 Gene: Shewmr7_3081: Glyoxalase family protein	Shewanella baltica OS155 Gene: Sbal_1009: Glyoxalase family protein	Shewanella denitrificans OS217 Gene: Sden_2124: Glyoxalase family protein	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1566: Glyoxalase family protein	Shewanella amazonensis SB2B Gene: Sama_2789: Glyoxalase family protein	Shewanella loihica PV-4 Gene: Shew_0913: Glyoxalase family protein	Shewanella pealeana ATCC 700345 Gene: Spea_0886: Glyoxalase family protein	Shewanella halifaxensis HAW-EB4 Gene: Shal_0938: Glyoxalase family protein	Shewanella piezotolerans WP3 Gene: swp_0890: Glyoxalase family protein	Shewanella sediminis HAW-EB3 Gene: Ssed_0992: Glyoxalase family protein	Shewanella woodyi ATCC 51908 Gene: Swoo_1045: Glyoxalase family protein	Glyoxalase family protein

CRON 2.
azrR	* Shewanella oneidensis MR-1 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: SO_3584: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella putrefaciens CN-32 Site: position = -66 score = 5.13942 sequence = GTTTATTTAATCTGTTAAAG Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Sputcn32_1018: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella sp W3-18-1 Site: position = -66 score = 5.13942 sequence = GTTTATTTAATCTGTTAAAG Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Sputw3181_3147: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella sp ANA-3 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Shewana3_3176: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella sp MR-4 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Shewmr4_2998: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella sp MR-7 Site: position = -104 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Shewmr7_3079: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella baltica OS155 Site: position = -67 score = 5.44781 sequence = GTTTATTTAATCTATTAAAG Site: position = -105 score = 6.47589 sequence = CTTTATTTAATCTTGTAAAG Gene: Sbal_1011: putative transcriptional regulator of azoreductase, AsnC family	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	* Shewanella amazonensis SB2B Site: position = -106 score = 6.65198 sequence = CTTTACTTAATTATGTAAAG Gene: Sama_2786: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella loihica PV-4 Site: position = -97 score = 6.56807 sequence = CTTTATTTAATTTTGTAAAG Gene: Shew_0915: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella pealeana ATCC 700345 Site: position = -104 score = 5.61701 sequence = CTTTACCAAACAAAGTAAAG Gene: Spea_0888: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella halifaxensis HAW-EB4 Site: position = -92 score = 5.35516 sequence = CCTTACAAAACAAAGTAAAG Gene: Shal_0940: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella piezotolerans WP3 Site: position = -80 score = 6.31833 sequence = CTTTACATAATAAAGTAAAG Gene: swp_0892: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella sediminis HAW-EB3 Site: position = -99 score = 6.31833 sequence = CTTTACTAAATGTTGTAAAG Gene: Ssed_0995: putative transcriptional regulator of azoreductase, AsnC family	* Shewanella woodyi ATCC 51908 Site: position = -104 score = 5.91111 sequence = CTTTACTAAGTAATGTAAAG Gene: Swoo_1048: putative transcriptional regulator of azoreductase, AsnC family	putative transcriptional regulator of azoreductase, AsnC family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog AzrR - Shewanellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --