Regulog BgaR - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Galactosides utilization
Effector:	Beta-galactosides
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Micrococcineae
By TF family - LacI
By effector - Beta-galactosides
By pathway - Galactosides utilization

Statistics of regulated genes
Genome	Genes	Operons
Clavibacter michiganensis subsp. michiganensis NCPPB 382	5	2
Brevibacterium linens BL2
Brachybacterium faecium DSM 4810
Beutenbergia cavernae DSM 12333
Arthrobacter sp. FB24
Arthrobacter chlorophenolicus A6
Arthrobacter aurescens TC1
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603	5	2
Kocuria rhizophila DC2201
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
bgaX	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_2699: Putative beta-galactoside ABC transport system, periplasmic component	Brevibacterium linens BL2	Brachybacterium faecium DSM 4810	Beutenbergia cavernae DSM 12333	Arthrobacter sp. FB24	Arthrobacter chlorophenolicus A6	Arthrobacter aurescens TC1	Janibacter sp. HTCC2649	* Jonesia denitrificans DSM 20603 Site: position = -175 score = 6.34263 sequence = CGATGTTTGCGTAAACATGC Site: position = -143 score = 6.49988 sequence = AGATGTTGACGTAAACATCG Gene: Jden_0101: Putative beta-galactoside ABC transport system, periplasmic component	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Putative beta-galactoside ABC transport system, periplasmic component
bgaY	* Clavibacter michiganensis subsp. michiganensis NCPPB 382 Site: position = -94 score = 6.49988 sequence = AGATGTTTGCGCAAACACCC Gene: CMM_2697: Putative beta-galactoside ABC transport system, permease component 2	Brevibacterium linens BL2	Brachybacterium faecium DSM 4810	Beutenbergia cavernae DSM 12333	Arthrobacter sp. FB24	Arthrobacter chlorophenolicus A6	Arthrobacter aurescens TC1	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0102: Putative beta-galactoside ABC transport system, permease component 2	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Putative beta-galactoside ABC transport system, permease component 2
bgaZ	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_2698: Putative beta-galactoside ABC transport system, permease component 1	Brevibacterium linens BL2	Brachybacterium faecium DSM 4810	Beutenbergia cavernae DSM 12333	Arthrobacter sp. FB24	Arthrobacter chlorophenolicus A6	Arthrobacter aurescens TC1	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0103: Putative beta-galactoside ABC transport system, permease component 1	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Putative beta-galactoside ABC transport system, permease component 1
bgaB	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_2700: Beta-galactosidase (EC 3.2.1.23)	Brevibacterium linens BL2	Brachybacterium faecium DSM 4810	Beutenbergia cavernae DSM 12333	Arthrobacter sp. FB24	Arthrobacter chlorophenolicus A6	Arthrobacter aurescens TC1	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0104: Beta-galactosidase (EC 3.2.1.23)	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Beta-galactosidase (EC 3.2.1.23)

CRON 2.
bgaR	* Clavibacter michiganensis subsp. michiganensis NCPPB 382 Site: position = -2 score = 6.49988 sequence = GGGTGTTTGCGCAAACATCT Gene: CMM_2696: Putative transcriptional regulator for beta-galactosides utilization, LacI family	Brevibacterium linens BL2	Brachybacterium faecium DSM 4810	Beutenbergia cavernae DSM 12333	Arthrobacter sp. FB24	Arthrobacter chlorophenolicus A6	Arthrobacter aurescens TC1	Janibacter sp. HTCC2649	* Jonesia denitrificans DSM 20603 Site: position = -143 score = 6.49988 sequence = CGATGTTTACGTCAACATCT Site: position = -111 score = 6.34263 sequence = GCATGTTTACGCAAACATCG Gene: Jden_0100: Putative transcriptional regulator for beta-galactosides utilization, LacI family	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Putative transcriptional regulator for beta-galactosides utilization, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog BgaR - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --